| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1367 |
|---|
| Symbol | |
|---|
| ID | 5188327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1426106 |
|---|
| End bp | 1427530 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640591215 |
|---|
| Product | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase |
|---|
| Protein accession | YP_001271953 |
|---|
| Protein GI | 148544583 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1705] Muramidase (flagellum-specific) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000955772 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATTG CAACATTGGC AAGTACAATG GTAATGTTCA CTACTGCAAA TGCTGATACA
AATGCGAATA ATTCTAGTGA AGAATCAGTT AATAATGCAG TACAAACAGA AGTTACCACC
AACAACATTA CGACTAATAA TGAAGTCCAG CTAGTTACTG CTACGCCTAA AAGTAGTGAT
GAAGTAGCTT CAAATAATGC TAATGAAAAT TCAAATAATG TACATGTAAA TGTAACAAGT
GATAACACAC AGACTGATGA GGATATTAGT CAATTTACAC CAATCCAACC ACAAGCAGCA
CAGGTGAAAA ATGGTTGGAT TAAGGAAAAT AATCAGTGGA CATATTATGA AAATGGTGAT
GTAACATCTG GTCGCAATTA TTCATATCTT CCTACTATTA ATGGTACTGG TAATAACTGG
TATTTAGTTG ATAATGGTGT TGTCCAATCT GGTGTCCAAA AGTGGGCTGG CACATACTAT
GATTTTGATC CAAATACTTA CTTACGAGTA GATAATAACT ATGTACAGTC ACAATGGGGG
ATGTGGTATC TATTTGGCAA TGATGGGCAA ATTCAAACCG GTGTCCAAAA GTGGGCTGGT
AGCTACTATT ATTTTGATCC AAGTACGTAT TTACGAGTAG ATAACGACTA CCGTCAATCT
CAATGGGGGT TATGGTATAT GTTTGGTAAT GATGGACGGA TTGCCACTAA AGTATATCAA
TGGGCCGGTA GTTATTATTA CTTTGATCCC AATACTTACT TACGAGTAGA TAATGATTAT
CGTCAATCTC AATGGGGTGA TTGGTATCTC TTCGGTGGTG ATGGGCGTGT ACTATCTGGC
CTTCAAAAGT GGGCTGGTAG CTATTACTAT TTTGATCCAA GTACATATTT AAAGGTAACT
AATAAAAATA TTACGGTAGC TGGACTAAAC CTTCATGCCG ATAGTACAGG GATTATTTCA
GGAATTAATC GGAATACTAA TTTCCTATTA AGTATCCATG ATGCGGCTTT AGATGGCTGG
CGACAATTCG GTGTATTGCC ATCTGTAACT GCAGCTCAAG CTATTCTTGA AAGTGCTTGG
GGTCAATCTG CTCTTGCTAC ACAAGGACAT AATTTGTTTG GTATTAAAGG TAGCTATAAT
GGTCAGTCAA TTGTTATGAG AACTGCTGAA TATGGTACTG GTGGTTATTA TTACATTAAT
GATGCATTTC GGAAATATCC AAGTAATTAT GAGAGTGTAG TTGACCACGG GCGTTTCCTT
GCTACTAATA AACGATACAG CAATCTTTTG TGGAAGAAAG ACTATGCTAC TGTTACAAAT
TATTTACATG CTGATGGTTA TGCAACAGAT CCTAAATATG CTTCTAGTTT AAATAATGTT
ATTCGAACAT ATAATTTAGA GGCTTGGGAC AAAGAAGTAT TTTAG
|
|---|
| Protein sequence | MAIATLASTM VMFTTANADT NANNSSEESV NNAVQTEVTT NNITTNNEVQ LVTATPKSSD
EVASNNANEN SNNVHVNVTS DNTQTDEDIS QFTPIQPQAA QVKNGWIKEN NQWTYYENGD
VTSGRNYSYL PTINGTGNNW YLVDNGVVQS GVQKWAGTYY DFDPNTYLRV DNNYVQSQWG
MWYLFGNDGQ IQTGVQKWAG SYYYFDPSTY LRVDNDYRQS QWGLWYMFGN DGRIATKVYQ
WAGSYYYFDP NTYLRVDNDY RQSQWGDWYL FGGDGRVLSG LQKWAGSYYY FDPSTYLKVT
NKNITVAGLN LHADSTGIIS GINRNTNFLL SIHDAALDGW RQFGVLPSVT AAQAILESAW
GQSALATQGH NLFGIKGSYN GQSIVMRTAE YGTGGYYYIN DAFRKYPSNY ESVVDHGRFL
ATNKRYSNLL WKKDYATVTN YLHADGYATD PKYASSLNNV IRTYNLEAWD KEVF
|
|---|
| |