| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1352 |
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| Symbol | |
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| ID | 5189181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 1407781 |
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| End bp | 1409247 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640591201 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_001271939 |
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| Protein GI | 148544569 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00278352 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATA ACAATAACAA CGAATCGCGG GAACATTACC GTAAACGGAT GGAAGAACGT
ATCCAACGTG ACGTTAATGA ACGCAAGCGT CGAGAACGCG AGGAAGCACA TAATAAGCGG
GAGAACCGTT TGCGACGAGA AGAAGAACAA TCGTCACCCG ATTATCAACC GCCCAAAAAG
CATCACTACC GAACGCCGAA TTGGGTGCGC GCTTTAATTG GGTTATTAAT TTGTCTAGTA
GTGGCTGGCG GATTTTATGA ATATCATAAA GTGCACTCAG TTGCCAAAGG GGTGTTTGGC
GCTGGTGATG GAAAAATTAG TAAAAAGTTA CAAAAGGGTG AACCAGTTTC CGTCCTGGCC
ATGGGAACAG ATGTCGGTGC TTTAGATCGT GGTAACAAGG GTGGTAATAC TGACTCTTTG
GAACTATTTA CTATTAATCC GAAAAAGAAA ACAATTACTA TGACTAGTAT TCCTCGTGAT
ATCCTAGTAC GGGTTGAGAC TAGTGATGGC CCTGATTACG TTAAAATCAA CGCTGCTTAT
TCAATCAATG GGCCAAAGCA AACCGTAAAG CAAGTATCAG AATTACTTGA TGTACCGATT
GATTACTATG CAGTTATTAA CATGGGGGTT CTCGAAAAAG TTGTTAATTC CGTTGGTGGG
GTTGAGGTTA ATAACCCATT TGCCTTTGAC TACGAAGGCC ACCACTTCAA GAAAGGTAAA
CAACACCTTA ACGGAGCAAA TGCGTTGAAG TATTCCCGGA TGCGGTATGA TGATCCAAAT
AATGATTACG GTCGTCAAAA ACGGCAACAA CAAATTCTAA AGAGCGTTAT TAATAAGTTC
AAGGCTTCAG GTTCAATTGG GGCAGCTAAC AAGATTTTAG ATGCTGTTGG GGATGGCGTT
AAGACTAATA TTCCAATTGA TGATATTGCG ACCTTGTATG GTAACTACCA TGGCGCAATG
AACAATGTTA AAACCTACCA TTTCCAAGGA CAAAACGCAA CGATCGAAGG AGTTTCCTTC
CAGATTGCCA GTCCTAAAGA AATTAACCGG GTATCAAAAC TGGTACGAGC TCAACTTGGC
TTAAAGGCTA AGAACGTTGT TAACCACGAA ACCAAGATGT ACAAGTCACA ACCACACTAT
AATGGTTACA ATGAAACAGA CTTTATCCTT CCTGGTGGTG CCAGTTACAA TGATCCTGGT
AGTGGTAATG GAAGTGATGA AGTTATTGGC TCAAGTAGTC ACCATTCATC TTCTGCAACT
GAAGAAAGTG CAAGTACTAC AGAAGAAAAC TACGGAACAA CCAATGCTTA TAGTGAATCA
CGGGCTGTTC TAACTACTGG CACAGCAAGC TCACAAGTAA GGCGATATTC AACTCCTCAA
TATCATAGTT ACAATAACGG ATACCCTTCA ACATATACTC ATCCTACTTA TGGGAATCAT
TACGGGTATA CTCACCGTTA TTATTAA
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| Protein sequence | MDNNNNNESR EHYRKRMEER IQRDVNERKR REREEAHNKR ENRLRREEEQ SSPDYQPPKK
HHYRTPNWVR ALIGLLICLV VAGGFYEYHK VHSVAKGVFG AGDGKISKKL QKGEPVSVLA
MGTDVGALDR GNKGGNTDSL ELFTINPKKK TITMTSIPRD ILVRVETSDG PDYVKINAAY
SINGPKQTVK QVSELLDVPI DYYAVINMGV LEKVVNSVGG VEVNNPFAFD YEGHHFKKGK
QHLNGANALK YSRMRYDDPN NDYGRQKRQQ QILKSVINKF KASGSIGAAN KILDAVGDGV
KTNIPIDDIA TLYGNYHGAM NNVKTYHFQG QNATIEGVSF QIASPKEINR VSKLVRAQLG
LKAKNVVNHE TKMYKSQPHY NGYNETDFIL PGGASYNDPG SGNGSDEVIG SSSHHSSSAT
EESASTTEEN YGTTNAYSES RAVLTTGTAS SQVRRYSTPQ YHSYNNGYPS TYTHPTYGNH
YGYTHRYY
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