Gene Lreu_1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1334 
Symbol 
ID5189143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1388645 
End bp1390087 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content40% 
IMG OID640591190 
Productglycosyl hydrolase 53 protein 
Protein accessionYP_001271928 
Protein GI148544558 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3867] Arabinogalactan endo-1,4-beta-galactosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAAAAG CAATTTTTGC TGGCCTAGCA GGTAATGAAT ATGCTTTAGA TGGTGCAAAG 
AATTGCTATG CCGATAATGG GGATGCTTAC CATTATGAAT TTTGGCTAGC TGGAAAAGAT
GCTACTGAGA AGTTAAATAA TTTCTTGATA GCTAATAATG GTGTTAAGTA TGGTGATCCA
ATTAAGATAA CGTATACTGC TACTTTAACT TGGGGTGCAG CTAAGAGCAC TGCTAATGAT
AAGACCCCGG CCAGTCGAAA AACTGCTGAA GAACTCAACC TAGCATATAA GACAGGTACT
GATACTGGTC TCCGTTATGA TAGTATTACT GTTGAGAAGA TTCCAAACAT GTCAGATGAT
ATGATTCGTG GAGTTGATAT TTCCAGTTAC CAGTCTTTAA TTAATGCTGG TGTTAAATTC
TATGACTTTA ATGGTCAAGA AGCTAACTTG TTTAAGATGT TAAAAGATGC TGGTGTAAAC
TGGATTCGTC TTCGTCTATG GAATGATCCA TACAATGCAG AAGGCTTTGG TTATGGTGGT
GGAAATAATG ATGAAGAGTC ATTAGTCAAG ATGGCTAGTG AGGCAAGTCA ATATGGAATG
AAAATCTTAG TTGACTTCCA CTACTCTGAT TTCTGGGCTG ATCCAGCTAA GCAACCGCTT
CCCAAAGCAT GGAAGAATTT ATCGTCAGCT GATCTTACAA AAGAGATAAG TTTATACACA
AGCAAAGTTC TTAACGATTT GAAGCAGGCC GGCGCTGATG TTGAAATGGT TCAAGTAGGG
AATGAAGTAA CTAATGGTGC TTTTGGTATT TGGACCGGCC GTGACCATGG TGAAAACTGG
GCGACTATAT GGGAAAGTGA CCAAGGAAAC CAAGTTGCTA AATATTTAGG AACCGCGTCA
GGAGCAGTTA GGTCAGTATT ACCAAATGCC AAGATTGCCA TTCAGCTTGA GACACCAAAC
ATTAGTAAGT ATCGTAGCAT TATGACGGTT TTGAAGAATA ATAATGTCGA GTATGACTAC
CTAGGAACTT CTTATTACCC ATTCTGGTCG ACTCATGACG GTAATAGTTG GTATGACAAT
GTTGATCTGG GATATGGCGC AAGTACACCA ATTAACTTAG AAGCGATTGA AAAGATGGCT
TGGCGGAAAT TTGGTAAGAA AACTGTTGTA CTAGAAACAG GCTGGATTAA TAATGTCAAT
GATGCCGATG GGACAGGAAA TTCTATTAGT GCTAATGATG AGATTCAAGC ATATAGTCAT
GATCCGCAAG GGCAGGTTAA TGCAATTGAA GATATGTATA AAGCATTAGT TGCCCAAGGC
GGAGTAGGTG GATTCCTGAT AAAGCTGGTT GGCAAAATTG GGACTATAAT AAGAAAATGT
CTGATGTATA TGGAACCGGT TGGGCATCAA AGAATGCAGT TGGTTATGCT CCAGATTCAG
TGA
 
Protein sequence
MLKAIFAGLA GNEYALDGAK NCYADNGDAY HYEFWLAGKD ATEKLNNFLI ANNGVKYGDP 
IKITYTATLT WGAAKSTAND KTPASRKTAE ELNLAYKTGT DTGLRYDSIT VEKIPNMSDD
MIRGVDISSY QSLINAGVKF YDFNGQEANL FKMLKDAGVN WIRLRLWNDP YNAEGFGYGG
GNNDEESLVK MASEASQYGM KILVDFHYSD FWADPAKQPL PKAWKNLSSA DLTKEISLYT
SKVLNDLKQA GADVEMVQVG NEVTNGAFGI WTGRDHGENW ATIWESDQGN QVAKYLGTAS
GAVRSVLPNA KIAIQLETPN ISKYRSIMTV LKNNNVEYDY LGTSYYPFWS THDGNSWYDN
VDLGYGASTP INLEAIEKMA WRKFGKKTVV LETGWINNVN DADGTGNSIS ANDEIQAYSH
DPQGQVNAIE DMYKALVAQG GVGGFLIKLV GKIGTIIRKC LMYMEPVGHQ RMQLVMLQIQ