Gene Lreu_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1311 
Symbol 
ID5188677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1357521 
End bp1358282 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content38% 
IMG OID640591153 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_001271905 
Protein GI148544535 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA TTTCTTGGAG TGTCAATGGC CTGAAGTCAG CTATTAACCA TGGATTTGTC 
GAAGATTTTA AGCGCCAAGA TGCTGACTTC TTCTGTCTAC AACGTACACG ATTGGATAAA
GGCGAAGAAC CGATTCAAAT TCCTAATTAT TACCAATACT GGAATTATGC AGAAAAGAAG
GGTTATTCTG GTACCGCCAT TTTCACTAAA TATAAGCCAG AAAACGTTAT ATACGGAATG
AATAATTCAA TTTTTGATAA AGAAGGGCGA CTAATCACGC TCGAATATCC AAACTTCTAT
TTGATTGATG TATACGTCCC AGTTTCAGGT GAAAAGCTGC AACATCTTGA TTATCGTCTC
GACTGGGATC GTGCTTTTCT TGATTATGTT ATTAATTTAC AAAGTAGTAA GCCAGTAATC
ATTGGCGGTG ATATGAGCAT TGCCTATCAA CCAATTGACT TAGCAGAGCC AACAGAAAAT
CATCATAAAG CCGGCTTTAC AAAACAAGAA CGAGCTGATT TTGGTAAATT ACTTAATGCT
GGCTTGACGG ATACTTTCCG TTATCTCCAT CCTAATTTGC ATGGTGCATA TACCTGGTGG
AGCTATCGGT ATGACGCACG GGAACGAAAT GTAGGTTGGC GTCTCGACTA CTTCTTAGTT
TCTGATGTAT GGAAAGAACG AATTGAAGAA GCCAAGATTC TTTCAGATGT TAAAGGCTCA
AGTCACTGTC CAATTGAACT TGTTGCGAAT GTTGAATTAT AG
 
Protein sequence
MKFISWSVNG LKSAINHGFV EDFKRQDADF FCLQRTRLDK GEEPIQIPNY YQYWNYAEKK 
GYSGTAIFTK YKPENVIYGM NNSIFDKEGR LITLEYPNFY LIDVYVPVSG EKLQHLDYRL
DWDRAFLDYV INLQSSKPVI IGGDMSIAYQ PIDLAEPTEN HHKAGFTKQE RADFGKLLNA
GLTDTFRYLH PNLHGAYTWW SYRYDARERN VGWRLDYFLV SDVWKERIEE AKILSDVKGS
SHCPIELVAN VEL