Gene Lreu_1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1310 
Symbol 
ID5189101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1355984 
End bp1357225 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content42% 
IMG OID640591152 
Productputative oxidoreductase 
Protein accessionYP_001271904 
Protein GI148544534 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCAA AGTATGAAAC AGAGTCGAAA GGTTACACGA TGACAACCGT AATGCAGGAA 
GCTGCACGAT GTTTATTATG TCATGATGCA CCATGTTCAC AAGCCTGTCC AGCACATACT
AATCCGGCCA AATTTATTCG AAGCGTTCTT TTTCGTAATG TCAAAGGGGC AGCTGAAACG
ATTCGGGAAA ACAATGCGCT AGGATCAATC TGTGCGCGTG TTTGTCCAAC TGAGCGTTAC
TGTGAAAAGG CATGTACCCG GGCTAAAATC GACGGACCAA TTGATATCGG TGGGATTCAA
CGGTATGTCA CTGATATGGA ACGAAAGATG AATATGAAGA TCCTTAAAGC CGGTAAACCA
AACGGGATGA GTATTGCTAT CATTGGTAGT GGCCCATCAG GTTTACAGGC AGCTACGACT
CTCCGCGAAA AAGGCTATGC AGTTGATATC TATGAAAAAG CTGCTAAGGC TGGCGGTTAC
TTGACCTACG GCATTCCTGA GTATCGGTTG CCGGAAGAAA TTGTGGATTA TGAAGTTCAA
CGAATTGTCG ACCTTGGTGC GCACATTATC TATAACACAA CTGTTGGAAA AGATATTTCA
ATGGATGATC TTAAAGCTCG TTACAATGCA GTGATTGTTG CTATTGGGAC AAGTGAAGCA
AAGATGCTGC CAATGTTTGA ACACAATATC TGTACCGAAT CAGCAATCTC ATTCCTAGCC
CGGGCAAAAG AAAGTAAGGG CAATTTAGAA GATCTTCCGC AAAATGTCCT TGTTATTGGT
GGTGGGGATG TTGCAATGGA TGTTGTAACA ACCTTAAAGA AGCTTAACGT CCCTTATGTC
ACCGATGTTA TTTATGAGCA GTTTGATGAA TTCAAAGCTT CTAAAAAAGA ACTTGCCGGT
GCTCAAGAAG CTGGTGTAAC AATTGTTGAT GGTTACGTTC CAAAAGAAGT TCATCAGAAT
CGTGCTACCT TTACTCACCG GAAGATTAAG AGTGAATTAA CTATTACTGC TGATAAGATC
ATTTTAGCAG TTGGTCAAAA AGCGAATGCA GAAGGACTAG ACATTGACTT ACAGCATAAT
GAAATTCCAT TCCGTGAACC ACGATTCCGG ACAAAGGATC CTAAAGTCTT TGCGACTGGT
GATATTGTTG CCGGAGATAA AACCGTTGTG GTAGCAGTAC AGAAAGGAAA AGAAGTAGCC
GAAGAAATAG ACCGGTTGTT AGGAGGACAA GAAAATGATT AA
 
Protein sequence
MTSKYETESK GYTMTTVMQE AARCLLCHDA PCSQACPAHT NPAKFIRSVL FRNVKGAAET 
IRENNALGSI CARVCPTERY CEKACTRAKI DGPIDIGGIQ RYVTDMERKM NMKILKAGKP
NGMSIAIIGS GPSGLQAATT LREKGYAVDI YEKAAKAGGY LTYGIPEYRL PEEIVDYEVQ
RIVDLGAHII YNTTVGKDIS MDDLKARYNA VIVAIGTSEA KMLPMFEHNI CTESAISFLA
RAKESKGNLE DLPQNVLVIG GGDVAMDVVT TLKKLNVPYV TDVIYEQFDE FKASKKELAG
AQEAGVTIVD GYVPKEVHQN RATFTHRKIK SELTITADKI ILAVGQKANA EGLDIDLQHN
EIPFREPRFR TKDPKVFATG DIVAGDKTVV VAVQKGKEVA EEIDRLLGGQ END