| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1283 |
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| Symbol | |
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| ID | 5188156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1330292 |
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| End bp | 1330969 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640591125 |
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| Product | abortive infection protein |
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| Protein accession | YP_001271877 |
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| Protein GI | 148544507 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1266] Predicted metal-dependent membrane protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000237963 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAAAG TAATTAAACA GTGGACATCT AAGGTGATTT TAATTGCACT GATGCTAATT
GCAATTGAAG TTCCCCCGAT GGCAGTTAAT TTTGCTTTAC GTTATTCAAA AACCAATCAG
CTTATTGTGG ACGGATTTAT GGCCTTATTC ATCGGTTTAA TGTTAGCGAT TATTTGGTGG
GCACACCGGA CATATGAAGC TTATAACCAA TTAGGGCAGC CAGCGGGAAT AAAGGTTGGT
TGGATTATCG GTGGGTACCT AGCAATTATT TTGGGAATGG ATGTCCTTAG CTACCTCAAC
CAACTTATCT ATCATCAAAC TGAGACAGCT AATAACGCGG CATTGGGAAG TATGCTTGGC
CATAATCAAG TGATCACGAT CGTATTTTGT TTCTCGGCAG TTGTTTTAAG TCCAATTGCT
GAAGAATTTA TTTTTCGTGG TACATTGACA AATATGTTCT TTAAGCGTGG CAACATTTGG
CCGAAAGTTA TCCTCTCGGG GGTAATCTTT TCTACTGGAC ATATGAGTAC TAACCCCATT
AGCTTTTTGA TGTATGCTTA TATGGGGATG GTCTTGGCAT ATGTTTATTT GCGAACGGAC
GACATTCGAA ATTCAATTGC GATTCATATG ATTAATAATG CGATTGCGAT GTATGTTCTC
TTAGCTCAAA TTGTCTAA
|
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| Protein sequence | MIKVIKQWTS KVILIALMLI AIEVPPMAVN FALRYSKTNQ LIVDGFMALF IGLMLAIIWW
AHRTYEAYNQ LGQPAGIKVG WIIGGYLAII LGMDVLSYLN QLIYHQTETA NNAALGSMLG
HNQVITIVFC FSAVVLSPIA EEFIFRGTLT NMFFKRGNIW PKVILSGVIF STGHMSTNPI
SFLMYAYMGM VLAYVYLRTD DIRNSIAIHM INNAIAMYVL LAQIV
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