Gene Lreu_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1250 
SymbolmurC 
ID5189251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1296152 
End bp1297456 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content42% 
IMG OID640591090 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_001271844 
Protein GI148544474 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000708446 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAA ATACATATTA CTTTGTTGGT ATTAAAGGGA CCGGGATGGC CTCTTTAGCA 
CGTATCCTTC ATGACAAAGG ACACCAAGTA CTAGGTTCAG ATATTGAAAA GGAAACATTT
ACACAAGCGC CATTATTAGC GGCGGGAATT AAAATTTTGC CATTTGATCC AGCCAATTTG
AAACCAGGGA TGATTGTTAT CCAAGGAAAC GCTTTTGATG ATGATCACCC AGAGATTAAA
CGAGCACATG AATTAGGCCT TAAAATTTTA AGCTACCCTG AGGCTGTTGA AAATGAGGTT
AAGAATCATA CTAGTATTGG GATTGCTGGA GCACACGGTA AGACCAGTAC GACTGCATTG
TTATCACACG TATTAGCAGC GGTTGAACCA ACCAGCTACT TGATCGGTGA TGGGGTAGGT
AAAGGAAATG CGGATGCACG CTTCTTTGTT TTTGAAGCCG ATGAATACCG TGATCACTTC
CTTGCCTACC ATCCAGACTA TGCAATTATG ACGAACGTTG ACTTTGATCA CCCCGATTAC
TTCAATGATT TGGCAGATGT CCGTGATTCA TTTGAAACGT ACGGTAAGCA GGTTCAACGG
GCAATTTTTG CTTGGGGAGA TGATCCTAGT CTTCGTGACT TAAACGTTGA TGTTCCGGTT
TACTACTATG GAACTAATCC AGATGATGAT TTCCGGGCAG AAAATATTCA ACGAACACCA
GAAGGCTCAA CATATGATGC TTACTTCCGC GACCAAAAAC TCGGCACATT CACCATCCAC
TTATATGGTG AACACAGTGT TCTTAATAGC TTAGCAGTAC TAGCAGTTGC ATACATGGAA
CACATGAACA TGGATGAGAT TCAACAGGAA TTAGCTAACT TTAGTGGGGT AAAGCGTCGT
TTCAGCGAGA CTGACATTGC GGATACAACC ATTATTGACG ACTATGCTCA CCATCCAAGC
GAAATTAAGG CAACAATTGA TGCGGCACGG CAAAAGTACC CAGATCGTGA AGTTATTGCT
GTTTTCCAAC CACACACATA CTCACGGTTG GCTGCTTACA TCGATGGCTT TGCAGAATCG
CTTAGCCGGG CAGATAAGAC TTTTGTTACC CCGATCTTTG GTTCAATTCG TGAAAATGCT
GGGAATGTTT CTAGTGCTGA TTTGGAGCAA CGGATTGACG GTAGTGAAGG CATCGACATG
GATACCATGG ATAAACTTTT GCAATATCAT AATGCAGTAG TTGTTTTCAT GGGTGCCGGT
GACGTTGAAA AGTACGAAGA AAAGTACAAA GAATTGTTAA AATAA
 
Protein sequence
MEQNTYYFVG IKGTGMASLA RILHDKGHQV LGSDIEKETF TQAPLLAAGI KILPFDPANL 
KPGMIVIQGN AFDDDHPEIK RAHELGLKIL SYPEAVENEV KNHTSIGIAG AHGKTSTTAL
LSHVLAAVEP TSYLIGDGVG KGNADARFFV FEADEYRDHF LAYHPDYAIM TNVDFDHPDY
FNDLADVRDS FETYGKQVQR AIFAWGDDPS LRDLNVDVPV YYYGTNPDDD FRAENIQRTP
EGSTYDAYFR DQKLGTFTIH LYGEHSVLNS LAVLAVAYME HMNMDEIQQE LANFSGVKRR
FSETDIADTT IIDDYAHHPS EIKATIDAAR QKYPDREVIA VFQPHTYSRL AAYIDGFAES
LSRADKTFVT PIFGSIRENA GNVSSADLEQ RIDGSEGIDM DTMDKLLQYH NAVVVFMGAG
DVEKYEEKYK ELLK