| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1232 |
|---|
| Symbol | |
|---|
| ID | 5189435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1281668 |
|---|
| End bp | 1282408 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640591072 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_001271826 |
|---|
| Protein GI | 148544456 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000000563403 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTATC AAAGTTTTGC CCAGTTATAT GACCAGCTTT TTGATCCTGA AATGTACCAG
AAGTGGGAAG AATTCACAAT CAAAAACCTT CCTGCTGATA CTAAGAATAT TTTAGATTTA
GCTGGCGGTA GTGGACGGTT GGGAGTGATG CTGGCTGCTC GTGGATTTGA CGTAACGGTT
GCTGACTTTT CTACTGAGAT GCTTAGTATT GCCGATCGAC ATGCGACGGA AGCAGGAGTT
AATATGAATC TCTTGCAAGC TGATATGCGG GACCTCAGTG CTTTACCGCA GTATGATGCG
ATTACTTGTT ATGCGGACTC TTTTTGTTAT TTAGACGATG CTGTGGCCGT TCAAAAGACC
TTCAATGAAA TTGCTGATCA CTTGAAAGAT AATGGTGTCT TCTTATTTGA TGTCATTTCT
CCTTATCAAA CTGATGTCGT TTATCCGGGG TATATGTTCA ACTACGAAGA TGAAGACCAC
CAGCGAGCAT TCATGTGGCA GTCTTTTAAA GACGATGATG TTGATCATGG TGTAATTCAT
GAATTAGCTT TTTTTACTCA AGATAATGAT GGACGCTATG ATCGTGTTGG AGAAACCCAT
TATGAACGTG CTTATGAATT GCCTTTATTA AAGCAGATGC TATCTCAAGC TGGCTTTAAT
TCTGTTGAAG TGGGATCAAA TTTTTCGACT TCTATCAAAG AAGAAAACCC AACACGATGG
TTCTTTAAGT GTCATAAATA A
|
|---|
| Protein sequence | MIYQSFAQLY DQLFDPEMYQ KWEEFTIKNL PADTKNILDL AGGSGRLGVM LAARGFDVTV
ADFSTEMLSI ADRHATEAGV NMNLLQADMR DLSALPQYDA ITCYADSFCY LDDAVAVQKT
FNEIADHLKD NGVFLFDVIS PYQTDVVYPG YMFNYEDEDH QRAFMWQSFK DDDVDHGVIH
ELAFFTQDND GRYDRVGETH YERAYELPLL KQMLSQAGFN SVEVGSNFST SIKEENPTRW
FFKCHK
|
|---|
| |