Gene Lreu_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1216 
Symbol 
ID5190027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1265791 
End bp1266429 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content40% 
IMG OID640591056 
ProductNLP/P60 protein 
Protein accessionYP_001271810 
Protein GI148544440 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000177513 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAA CAACGAAGAA AATTCTTGCA TCGTCGTTAG GGGTAGCTGG CGCAATGGCA 
ATGGGTACTG TAACTGCTAA GGCTGATGCA ACTGTTACGG TCAATGCTGG CGATAGTTTA
AATGGGATTG CTCAAAAGTA TAATGTTAGT GCGGATGATA TTGCAACCGC TAATCACTTG
CAAAATAAAG AGTTGATTTT TGCAGGACAA AAGTTGACAA TTCCAACCAA AGATAAAAAT
GAAACACCTG CTAATAATAC TGAGAAAAAG GATCAAGCCA ACAAGAATAG TCAAAATCTA
CAAGATTCTG TTAACAAGGC AATGTCTTAT TTAGGAACCC CTTATGTTTG GGGTGGTAAT
AAGCCAGGTG GATTTGATTG TTCTGGGTTG GTTCAATATT GCTACGGTAT TCCTCAACGG
ACGACGTATG AACAACAAGC TTTAGGACCA CATATTCACG ATAACGTCTT AAACGCGCCA
TATGGGGCCC TTGTTTTTTA TGGTTCTGAT GATGCGCCAT ACCACGTCGC TATTTCACTA
GGGGACGGTC GGATTATTCA AGCTCCAAAC GAGAATGAAA CAGTTAAAAT TACTGACCAA
CAATACTTCC CTGGAAATTA CTATGTTGTT ATGCATTAA
 
Protein sequence
MKSTTKKILA SSLGVAGAMA MGTVTAKADA TVTVNAGDSL NGIAQKYNVS ADDIATANHL 
QNKELIFAGQ KLTIPTKDKN ETPANNTEKK DQANKNSQNL QDSVNKAMSY LGTPYVWGGN
KPGGFDCSGL VQYCYGIPQR TTYEQQALGP HIHDNVLNAP YGALVFYGSD DAPYHVAISL
GDGRIIQAPN ENETVKITDQ QYFPGNYYVV MH