| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1192 |
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| Symbol | rplU |
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| ID | 5188394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1242685 |
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| End bp | 1242993 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640591031 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_001271786 |
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| Protein GI | 148544416 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000000108547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACGCAA TTATCGTTAC TGGTGGTAAG CAATACAAGG TAGAAGAAGG TGCTTCTATC
TACGTTGAAA AGCTTGATGC TAAGGAAGGT GACAAGGTAA CTTTCGATCA AGTTATCTTT
GTCGGTGGAG ACGACACTAA GATCGGTACT CCTGTAGTTG ACGGTGCTTC TGTTGAAGGT
ACTGTTGATA AGCAAGGTAA GGAAAAGAAG GTTGTTACCT TCAAGTACAA GCCTAAGAAG
CACACTCACA CTAAGCAAGG TCACCGTCAA CCTTACACTA AGGTTACTAT CAACAAGATC
AACGCTTAA
|
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| Protein sequence | MYAIIVTGGK QYKVEEGASI YVEKLDAKEG DKVTFDQVIF VGGDDTKIGT PVVDGASVEG
TVDKQGKEKK VVTFKYKPKK HTHTKQGHRQ PYTKVTINKI NA
|
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