| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1185 |
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| Symbol | nusB |
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| ID | 5188465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1238496 |
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| End bp | 1238912 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640591024 |
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| Product | transcription antitermination protein NusB |
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| Protein accession | YP_001271779 |
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| Protein GI | 148544409 |
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| COG category | [K] Transcription |
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| COG ID | [COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0066267 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTTTGA ACCGACACAT GATTCGTGAG GAGGCTTTCC AAGTTCTCTT TGCTTTGCAA
TCAGATTCTG AAGCTGATAT TCAAACCGTA TATGAGGCGA TTCCTCATCA TGATGAAAAG
CAAATTCCGC CTTATTTACT AACTTTGGTA AATGGGGTGC GGGAACATCA AGATCAGCTT
GACGAACAAA TCAATGATCT CCTGGCAAGC GGATGGACGA TTAACCGTTT AGCAAAGCCA
GATTTAGTGA TTTTACGGCT TGCTCTATTT GAAATTCAAT ACGCTGAAAA TGTTCCAACA
GTAGTAGCAA TTAATGAAGC ATTGGAACTT ACGAAAACAT TCAGTAGTGA TAAGTCACGT
AAATTTATCA ATGGAGCCCT TGGTAAATTT GAAAAACAAG TCAACGAAAA TAATTAA
|
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| Protein sequence | MSLNRHMIRE EAFQVLFALQ SDSEADIQTV YEAIPHHDEK QIPPYLLTLV NGVREHQDQL
DEQINDLLAS GWTINRLAKP DLVILRLALF EIQYAENVPT VVAINEALEL TKTFSSDKSR
KFINGALGKF EKQVNENN
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