Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1180 |
Symbol | |
ID | 5188146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1234170 |
End bp | 1234991 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640591019 |
Product | hemolysin A |
Protein accession | YP_001271774 |
Protein GI | 148544404 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1189] Predicted rRNA methylase |
TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000850767 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG AACGTGTAGA TGTATTGTTA GTCCAACAAG GGCTGTTTGA CTCTCGCGAA CAGGCAAAGC GGGCAGTGAT GGCAGGAGAA ATTCTTGGCA AAAATAATGA ACGATTAGAT AAACCAGGAC AAAAGATTCC GATTACCACA ACCCTTCACA TGAAAGGTCA TAAAATGCCG TACGTTAGTC GGGGTGGCTT GAAGTTAGCG AAAGCATTAA AGGTTTTTGA TATTTCAGTT AAGGACAAGA CGGTTTTAGA TATTGGTTCA TCAACTGGTG GCTTTACTGA TGTAATGTTA CAAAATGGGG CGAAGTTAAG TTACGCTCTT GATGTCGGAA CTAATCAGTT AGTTTGGCAA TTACGGGAGG ATCCCCGGGT AGTTGTTATG GAGCAGACCA ATTTTCGTTA CAGCAAGTTA GCAGATTTTA CCAGTGGTCA ACCAGAATTT GCTTCGATTG ATGTTTCGTT CATTTCCCTT CGTTTGATCT TACCACCATT GGCACAGATA CTGAAAATGG GTGGTGAAGT AGTAGCGCTG ATTAAGCCGC AATTCGAAGC GGGCAAAGAG CATGTTGGCA AAAATGGGAT CATTCATGAT CATAAAGTTC ACCGGGCCGT TTTGGAAGAA GTACTGACTT TTGCCCGTGA AGATCATTTC GACATCCTTG GATTAGACTA TTCACCAATC AAAGGGGGAC AAGGAAATAT GGAATTTTTA GTTCACCTAC GCCTAAGTGA GAATCCGGGG ATCGTTGCCG AAAAAGTAAA TATCGATAAG GTTATTGCAG CCGCGGATGA TGATTTGAAT CATAAGGAAT AA
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Protein sequence | MKKERVDVLL VQQGLFDSRE QAKRAVMAGE ILGKNNERLD KPGQKIPITT TLHMKGHKMP YVSRGGLKLA KALKVFDISV KDKTVLDIGS STGGFTDVML QNGAKLSYAL DVGTNQLVWQ LREDPRVVVM EQTNFRYSKL ADFTSGQPEF ASIDVSFISL RLILPPLAQI LKMGGEVVAL IKPQFEAGKE HVGKNGIIHD HKVHRAVLEE VLTFAREDHF DILGLDYSPI KGGQGNMEFL VHLRLSENPG IVAEKVNIDK VIAAADDDLN HKE
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