Gene Lreu_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1166 
Symbol 
ID5188575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1219387 
End bp1220037 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content39% 
IMG OID640591005 
Productthiamine pyrophosphokinase 
Protein accessionYP_001271760 
Protein GI148544390 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1564] Thiamine pyrophosphokinase 
TIGRFAM ID[TIGR01378] thiamine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000000000150801 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTAA ATGTACTAGT TGGCGGTCCG CTTGAAATGG TTCCAACCGA GTTGATTTTG 
CAACGTAAAG ATGAAAAATG GATTGGGGTT GACCGGGGTG CTTTAAGATT ATTAAGGTGG 
GGAATTAAGC CGGTATTAGC AATTGGTGAC TTTGATTCCG TTACCGGGGA TGAATTGCAA 
GGTTTGGAAG GTAAAATTAC TCGTATAAAA ACTTATCCTC CTGAAAAAGA TTATACCGAT 
ACGCAATTGG GCGTGAAATT TGCAATTCAG GAACAGGCTG ATGAAATTGA AATTTTTGGT 
GCAACGGGAG GGCGCTTAGA CCATTTATTA GCTAACCTCT TTCTTCCGCT GCAGAGTGAA 
TTTAAACCAT ACTTAACCCG GATTAAGATT ATTGACTGTC AAAATGTTGT CTCTTATTAC 
TTGCCAGGGG ATTACACTAT TTCTCGCCTG CCGCATAAGA AGTATCTGGC CTTTGTCAAT 
CTTACTCCTG TTCAAGGCCT TACGTTGAAA GACGAAAAAT ATCCACTGCA AAACTGGAGT 
AGTCAAATTC CATTTTCGTG GACAAGCAAT GAATTTACAG CTGAAGAAAA TCATTTTTCA 
TTTGAAAGTG GAATTGTTTC TGTAATTCAG TGTAGCGACC AATTAAAATA G
 
Protein sequence
MRVNVLVGGP LEMVPTELIL QRKDEKWIGV DRGALRLLRW GIKPVLAIGD FDSVTGDELQ 
GLEGKITRIK TYPPEKDYTD TQLGVKFAIQ EQADEIEIFG ATGGRLDHLL ANLFLPLQSE 
FKPYLTRIKI IDCQNVVSYY LPGDYTISRL PHKKYLAFVN LTPVQGLTLK DEKYPLQNWS 
SQIPFSWTSN EFTAEENHFS FESGIVSVIQ CSDQLK