Gene Lreu_1057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1057 
Symbol 
ID5188649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1120617 
End bp1121618 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content45% 
IMG OID640590897 
Productcell envelope-related transcriptional attenuator 
Protein accessionYP_001271652 
Protein GI148544282 
COG category[K] Transcription 
COG ID[COG1316] Transcriptional regulator 
TIGRFAM ID[TIGR00350] cell envelope-related function transcriptional attenuator common domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0371332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGACG AAAATAATCG ACCCTTGAAT AATGATGATG GTATGCAACA ACCGGAACAA 
CACCATCATC ACCACCACAG ACATCATCGG CGTCACCGGG GATGGAAGAT CTTCTGGTCA 
GTTGTAGGGG TATTAGTCCT CGTCGCCCTG TTCTTTGCGG GGATGGCATG GCACAACCTA 
AAATCAACGA CCGATGATAT GTATAGTAGC GCGGGTGCTA CCAAGTCGCG GGATGCGCAA 
AAGGTGCTTG ATCAAAAGAA ACCCGTGTCA ATCCTCCTGT TAGGAACTGA TACCGGGGCA 
CTTGGTCGGG ATTATAAGGG TCGGACGGAT ACGATCATGG TAATGACTTT GAATCCAAAG 
ACGAAGACGA CCACGATTGT TAGTCTTCCT CGGGATATGA AGGTTAACTT ACCGGGTTAT 
CCGCAATATT CACCAGCAAA GATCAATGCT GCTTATACCT ATGGGGGAGT CAAGGAATCA 
ATTAATACGA TCCAGGACCA CTTCAATATC CCAATTGACT ACTATGTCTT AGTCAACATG 
GGTGGTTTGG AAAAGGCAAT CAACCAAGTC GGTGGAGTTG ATGTCAAGTC CCCATTGACG 
TTTGATTATG AAGGCTATCA CTTTGAGAAG GGTGAGACCT ACCACATGAA TGGAAAAAAG 
GCCCTTCAAT TCAGTCGGAT GCGGTATGAC GATCCTGATG GTGACTATGG TCGGCAACAA 
CGGCAACGGT TAGTAATTAC TGCTTTGCTT AAGAAGTCCG TTTCATATAA GACGGTTCTT 
AACCGGTCAT TCTTACGGTC AGTATCTGAT AACTCACAAA CCGATTTGAC CTTCAATGAT 
ATGATGCGGT TAGCGCAAAG CTATCGTGAT ACGAACGAAC ACATCGTTCA AGATCATGCG 
CAAGGGCGAG GGCAAAATGA AGACGGTCAA GCCTTTGAAG TGGTGCCAAC CAGTGAGCAA 
CAACGGATCA CTAACTTGTT ACAAAATAGT CTAAAAAATT AA
 
Protein sequence
MSDENNRPLN NDDGMQQPEQ HHHHHHRHHR RHRGWKIFWS VVGVLVLVAL FFAGMAWHNL 
KSTTDDMYSS AGATKSRDAQ KVLDQKKPVS ILLLGTDTGA LGRDYKGRTD TIMVMTLNPK 
TKTTTIVSLP RDMKVNLPGY PQYSPAKINA AYTYGGVKES INTIQDHFNI PIDYYVLVNM 
GGLEKAINQV GGVDVKSPLT FDYEGYHFEK GETYHMNGKK ALQFSRMRYD DPDGDYGRQQ 
RQRLVITALL KKSVSYKTVL NRSFLRSVSD NSQTDLTFND MMRLAQSYRD TNEHIVQDHA 
QGRGQNEDGQ AFEVVPTSEQ QRITNLLQNS LKN