Gene Lreu_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0873 
Symbol 
ID5189767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp923128 
End bp924255 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content28% 
IMG OID640590705 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_001271473 
Protein GI148544103 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTATA AATACTTAGG AGATATTGCT GAGATTAAAG GTGGCAAAAG AATGCCTAAA 
GGAACTAGAT TGCAACAAGA AAAAAATCAA CATCCGTATT TAAGGATTAC TGATTATGAT
GGTAAAAGTT TTGATCGTAA TAGTATTAGA TATGTTCCTG ATGAGGTGTT TGAAAAGATT
AGTAACTATA CAGTAACAGA GGGAGATATT TTTTTATCAA TTGTTGGAAC TATAGGGATA
GCGACCACGA TTGATAAAGA ATATGATAAT GCTAATCTAA CAGAAAATGC AGTTAAAATA
ATTCCTGATG AGTCGGTAAA TTCCAAATAT ATTTTATATT TTTTACAATC GATGTTAGGA
CAAAGACAAA TGAATGAACT TTCTGTTGGC TCAACACAAA AAAAGTTGCC TATAAAAAAC
ATTAAAAAAA TCAAGATTCT TTTACCTAAT TTAGAAATAC AAAATAAAGT TGTATCTAAT
TTACAAATCT TAGATAAAAA AATAGCTTTG AACAATCAAA TAAATGATAA TTTAGATGCT
TTATTAACTA ATATATTCAA AAAATATATG ATTAATGACG GTTTTGAAAA ATCAAACTTA
ACTCAAATTG CAAATTATAA AAATGGGTTA GCTATGCAAA AGTATAGACC TAATTCTAAT
GAAGAAAGCT TACCAGTTCT TAAAATAAAA GAGTTAAATC AAGGAAATAC TGATGATTCG
TCCGATAGAT GTTCGGCTAA TCTTGATAAT TCTGTAATAG TTAATACTGG CGACATAATT
TTTTCGTGGT CAGGAACTTT ATTAGTAAAA AATTGGACGG GAGACAAGGC AGGTCTTAAT
CAACATTTAT TTAAGGTTAC CTCTAATAAG TATCCTGCAT GGTTTATTTA TGAATGGACT
AAGTATCATT TATTGAGGTT TCAAGCAATT GCCGCCGGAA AAGCTACAAC CATGGGTCAT
ATCAAAAGAA GTGATTTAAA ATCATCACTA GTATATATTC CCTCTCAATT ATTTTTAGCG
AAAATGGATA GTCAACTAGC ACCAATTTAT AGTCAAAGGT TAAACCTAAT TAAAGAAAAT
CAACAATTAT CGAAACTTAA GCAGACTTTG CTTAAGAAAT ATTTTTAA
 
Protein sequence
MIYKYLGDIA EIKGGKRMPK GTRLQQEKNQ HPYLRITDYD GKSFDRNSIR YVPDEVFEKI 
SNYTVTEGDI FLSIVGTIGI ATTIDKEYDN ANLTENAVKI IPDESVNSKY ILYFLQSMLG
QRQMNELSVG STQKKLPIKN IKKIKILLPN LEIQNKVVSN LQILDKKIAL NNQINDNLDA
LLTNIFKKYM INDGFEKSNL TQIANYKNGL AMQKYRPNSN EESLPVLKIK ELNQGNTDDS
SDRCSANLDN SVIVNTGDII FSWSGTLLVK NWTGDKAGLN QHLFKVTSNK YPAWFIYEWT
KYHLLRFQAI AAGKATTMGH IKRSDLKSSL VYIPSQLFLA KMDSQLAPIY SQRLNLIKEN
QQLSKLKQTL LKKYF