Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0776 |
Symbol | |
ID | 5189730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 848185 |
End bp | 849057 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640590609 |
Product | GTP-binding protein YlqF |
Protein accession | YP_001271377 |
Protein GI | 148544007 |
COG category | [R] General function prediction only |
COG ID | [COG1161] Predicted GTPases |
TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.119569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACAA TTCAATGGTT CCCAGGACAC ATGGCAAAAG CATTACGCCA AATTCGTGAA CAAATGCCAC TAGTAGATAT TTTATTTGAG CTAGTAGATG CTCGTGTCCC TTATTCGTCA CAAAATCCAG AAGTGGCACT AGCTGCAGGA GAAAAGCCCA AACTTTTAAT TATGACAAAA ACGGACCTAG CAGATCAAAA ACGATTAAAT GAATGGATTA AATACTTTGA GCAGCATAAT CAACCAGTTC TTGCCCTCGA TTCACGCCAA AATAACGTGG CAAAAGTTGT AACGGCTAAA AGTAAAGAGA TATTAAAAGA TAAATTGGCA GAAGAAAAAG CCAAGGGAAT GAAAAAGAGG CCAATTCGGG CAATGTGTGT TGGTGTTCCC AATGTAGGAA AATCAACCCT TTTAAATCAC CTGGTAAAAA AGAACGTTGC GGCTACTGGA AACCGTCCCG GAGTCACTAC TGGACAGCAA TGGTTGCGGT CATCAGCAGA ATTGGAATTA CTCGATACTC CTGGTGTCCT TTGGCATAAA TTTGCTACTC CTAAGCAAGG GATAATGCTG GCTTTAACAG GAGCAATTAA AGATAGCTTA TACGCAAAGG ATGATGTAGC GTTGTTTGCC CTTGATTACT TGCGGCAGCA CCAGTCAGAA GTGTTAAAGC AACGTTACCA CTTAACTGAT GCAGATCTGG ATGAATCAGT TACCAATCCA GATTTACTAT TAACGATTAC TGCTAAAATG GGCTTTCGTG ATGATTATGA CCGGGCTAGT GAACGGTTGA TTTTTGACTT GCGAAAAGGA AAATTAGGAC CAATCACTTT GGAAGTACCC GCTGACCTAA ATGAGGATGG ACTAAATGAA TAA
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Protein sequence | MATIQWFPGH MAKALRQIRE QMPLVDILFE LVDARVPYSS QNPEVALAAG EKPKLLIMTK TDLADQKRLN EWIKYFEQHN QPVLALDSRQ NNVAKVVTAK SKEILKDKLA EEKAKGMKKR PIRAMCVGVP NVGKSTLLNH LVKKNVAATG NRPGVTTGQQ WLRSSAELEL LDTPGVLWHK FATPKQGIML ALTGAIKDSL YAKDDVALFA LDYLRQHQSE VLKQRYHLTD ADLDESVTNP DLLLTITAKM GFRDDYDRAS ERLIFDLRKG KLGPITLEVP ADLNEDGLNE
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