Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0768 |
Symbol | |
ID | 5188834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 841251 |
End bp | 843161 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640590601 |
Product | ABC transporter related |
Protein accession | YP_001271369 |
Protein GI | 148543999 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACAA TGCGTGCAGA GGGTCTAACC AGCACATACG GTGAGAAGAC CTTATTTGAT GATATTTCGT TTATTATCAA TGAAAATGAT CGAATTGGAC TGATTGGTGT TAATGGAAGT GGAAAAACCA GTCTTCTTAA CGTAATTAGT GGGGAAGTAA ATCCAGAAGG CGGCGGGCAG ATCACTAAGC CTAATGATTA CACGATCGGT TATTTAAAAC AGCAGCCTGA ACTTGATGAA AATAAAACAA TCATGGAAGC TGTTTTTGAA GGTAAACAAC CAGTCTTTGA AACAATTCGT CAATATGAGC TGGCTCTTGA ACGTTTTACA AAGCATCCAG AAGATCCACA AGCAATCGAC CGTTACACAA AAATGCAGGC ACGGATGGAC CAAGAAGATG CATGGGAGGC AGATAGTCGG GTGAAGACGA TTCTGACCCA GTTAAAGATA AAAGATGTAA GTCAAAAGAT TGCTCAACTT TCTGGAGGAC AAAAGAAACG GGTTGGGTTA GCGCAAGTCT TAATTCAACA GCCAGACCTC TTATTGCTCG ATGAACCGAC TAACCACTTA GACCTTGATT CGGTAGTTTG GCTCCAGGAT TTCCTTCGCA GTTATAAGGG TGCTGTCCTC GTTGTTACCC ATGATCGGTA CTTCCTTGAT CAAATTACAA ATCATATCTG GGAGCTATCT TTTGGTAAAC TTTATCACTA CGAGGGAAAT TATCAGGACT TTGTAGCAAA AAAGGCGGAA CGAGTAGAGT TAGCTAAAGA TACTGAGAAA AAGAATCAAC AGCTGTATAA AAAAGAATTA GCCTGGATGC GGACAGGTGC AAAAGCCCGT TCTACAAAAC AAAAGGGACG GATCAATCGG TTCCACGAAT TAGAAGGAAA AATCGGTAAT CTTAAAACCG ATGAAGATAT TGCTATCAAT CTTGGATCAC AACGTCTAGG GAAAGATGTT ATTCAATTTA AGGATGCTAA CTTAAAATTT GATAATCACC AAATCCTCCA TGACTTCAAT TGGCTTGTTC AGGCAGGCGA TCGAATTGGA ATTACTGGTG AAAACGGAGC GGGTAAGACG AGTTTATTAA ATGTGATTGC CCAACGTGTT CCCCTAGATA GTGGTGTCCT TAAGATTGGG GAAACCGTTA AGTTAGGGTA TTATACCCAG CAAACAGAAG GAATTGACAA TGATAAGCGG ATGATTAGTT TCTTGTCTGA AATTGCTGAT AATGTTACTG ATAAAGATGG CAATAAGCTC AGCGTTACCC AATTATTAGA ACGCTTCTTA TTCCCTCGTT TTATGCATGG TACTTTGATC CGAAAACTTT CTGGGGGTGA AAAGCGGCGA TTATACCTCT TAAAGATCTT AATGCAGCAG CCCAATGTCT TATTACTAGA TGAGCCAACT AACGACCTTG ATATTGGAAC ATTGACAGTT CTTGAAGATT ACCTAGATAA TTTTGCGGGA ACTGTAATTA CGGTTTCTCA TGATCGCTAT TTCTTAGATA AAGTGGCTGA CAACTTGCTA GTCTTCAACG GGAATGGAGA TATTGAGCGT TATACGGGAC GCTTTACTGA TTATCTAACT GCTAAAAAGG AAGAGGCAGA TAAGGATAAA GGGCTTAAAA ATGATCAAAA AGCCCTTGCC AAAAAGCAGG TAAATAAGCA AGAACCAGCT AAGAAAGAAA AAACAAAACT TACTTATGCT GAACAACTTG AGTGGGATCA TATTGATGAA GAATTAGATG CCCTTGATCA ACAGCATCAG CAATTAGAAA ATGAAATGGC TGAAGCAGCA AGCGATTATA CGAAAATTGC TAAGTTACAG AAGCAGCTAA ATGAAATACA AGAAAAAATT GATGAAAAGA CAGCTCGTTG GGAGTATTTA AGCACATACG TTGACGAGTA A
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Protein sequence | MQTMRAEGLT STYGEKTLFD DISFIINEND RIGLIGVNGS GKTSLLNVIS GEVNPEGGGQ ITKPNDYTIG YLKQQPELDE NKTIMEAVFE GKQPVFETIR QYELALERFT KHPEDPQAID RYTKMQARMD QEDAWEADSR VKTILTQLKI KDVSQKIAQL SGGQKKRVGL AQVLIQQPDL LLLDEPTNHL DLDSVVWLQD FLRSYKGAVL VVTHDRYFLD QITNHIWELS FGKLYHYEGN YQDFVAKKAE RVELAKDTEK KNQQLYKKEL AWMRTGAKAR STKQKGRINR FHELEGKIGN LKTDEDIAIN LGSQRLGKDV IQFKDANLKF DNHQILHDFN WLVQAGDRIG ITGENGAGKT SLLNVIAQRV PLDSGVLKIG ETVKLGYYTQ QTEGIDNDKR MISFLSEIAD NVTDKDGNKL SVTQLLERFL FPRFMHGTLI RKLSGGEKRR LYLLKILMQQ PNVLLLDEPT NDLDIGTLTV LEDYLDNFAG TVITVSHDRY FLDKVADNLL VFNGNGDIER YTGRFTDYLT AKKEEADKDK GLKNDQKALA KKQVNKQEPA KKEKTKLTYA EQLEWDHIDE ELDALDQQHQ QLENEMAEAA SDYTKIAKLQ KQLNEIQEKI DEKTARWEYL STYVDE
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