| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0753 |
|---|
| Symbol | |
|---|
| ID | 5188159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 826886 |
|---|
| End bp | 827779 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640590586 |
|---|
| Product | tyrosine recombinase XerD subunit |
|---|
| Protein accession | YP_001271354 |
|---|
| Protein GI | 148543984 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000038176 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACG AAGTGGCTGC GTTTTTAGCT TTTTTAAAAG ATGAACGACA ATTAAGCGAT
AATACCTTGA TGAGTTATCA ACGTGACTTA GAACAAACTG TGACTTATTT AGAAGATCGA
GGGATTGTCG ATTGGCAACA GGTGGACCAC TATTTACTAA TTGACCTTCT TAATAGTCTT
CGTCAGCAGG GGAAAGCTAA TTCAACAATT AACCGTGTGA TTTCAAGTTT ACGGCAATTT
TATAAATACA TGATCCGTCA CCATAACCTA ACCATTAATC CAATGGAAAT GATTGATCAC
CAGTATACCT TTAACCAACC ACCTGCACCG GTAATTTTAA CTGAAAAAGA AATTGAACAA
CTGCTGGCAG TCCCGGATGT TTCAACCCCA ATTGGCCTTC GTGATCGAGC GTTGTTAGAG
ATTATGGATG CAACGGGAAT GAGGGTTAGT GAAGTAATTG CTTTGGATCT GACAGCACTT
CATCTCGACG TTAAGCTTCT ACAACTAACG GGAAAGAATG AACGTGAACG AATGATTCCC
TTAAGTCAAC CAGCAGTTAA GTGGCTTACC GACTACCTAG ACCGCGGTCG ACCACGTTTA
CTCAGAGATG AGCACGAAAC GCGGGTGTTC TTAAATGCTC ATGGTTATCC TTTGACGCGG
CAAGGAATTT GGAAAAAAAT GAAGGAATGG GTTAGTGAGG CTAAAATTAA AAAAGAAGTT
ACTCCTCAAA CCATGCGCTA TTCTTTTGCT GTTCATTTAA TAGAAAATGG CGCCGACGTC
CAATTAATCC AAGAAATCCT TGGTTATAAC GCGATGAAGG CTCTCCAACC ATATTTACAG
GTTTCGCCGC AACAGTTATC TGCTAACTAT ATGAAATATC ATCCGCGTGC ATAG
|
|---|
| Protein sequence | MNNEVAAFLA FLKDERQLSD NTLMSYQRDL EQTVTYLEDR GIVDWQQVDH YLLIDLLNSL
RQQGKANSTI NRVISSLRQF YKYMIRHHNL TINPMEMIDH QYTFNQPPAP VILTEKEIEQ
LLAVPDVSTP IGLRDRALLE IMDATGMRVS EVIALDLTAL HLDVKLLQLT GKNERERMIP
LSQPAVKWLT DYLDRGRPRL LRDEHETRVF LNAHGYPLTR QGIWKKMKEW VSEAKIKKEV
TPQTMRYSFA VHLIENGADV QLIQEILGYN AMKALQPYLQ VSPQQLSANY MKYHPRA
|
|---|
| |