Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0631 |
Symbol | |
ID | 5189580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 699235 |
End bp | 700341 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640590464 |
Product | pyruvate dehydrogenase (acetyl-transferring) |
Protein accession | YP_001271233 |
Protein GI | 148543863 |
COG category | [C] Energy production and conversion |
COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
TIGRFAM ID | [TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000665429 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCAATA CCAAAGCTGT CAATTTTGCT GAGATTAAAG CCAATGAAGG GGTACCTTAT GCAAAACCTG TACAAATTCT TGATAACGAC GGAAATGTTG TTAACAAAGA ATTAATGGCT AATTTCAGTG ATGAATTATT AGTTGACTTA ATGAAAAAAA TGGTTTGGGA ACGTGCCTTG CATGAACAAA CAATGAGTTT CTCAAAGCAA GGTCGGTTAG GTTTTTATGC TCCAACTTGG GGTGAAGAAG CTTCTGAAAT GGGAACCGCT GCTGCATTTA AGAAGCAAGA CTTCCTATTT CCGGCATACC GTGATTTGCC ACAATTAATT CAACATGGAG CAACTGTTGC TCAAATGTAC TTATGGTCAA AGGGACACAT CAAAGGTAAT CTTTTTGATG CACGTGCTCT CCGGCCACAA ATCATTATTG GTGCTCAGAT GGTCGAAATG GCTGGTGGTG CTCTTGGAAT TAAGAAGAAT GGTGAGAAAG ACACTGTTGC CTATGCTTAC ACTGGTGAAG GCGGAAGTTC ACAAGGGGAT ACTTATGAAG GAATGAACTT TGCTGGTGCA TTCCAAGTAC CTGGTGTATT TATTATTCAA AATAATGGAT GGGCTATTTC GTTCCCACGA AAGCTCCAAA CTGAAGCACA AACAATTGCC CAAAAGGCTG TTGCTGCTGG AATTCCAGGT GTTCAAGTTG ATGGAATGGA CGTCCTTGCA TGTTATGAAG TTGCAAAGGA AGCTCGTGAA TTTGCTGCTG CCGGTAATGG ACCAGTGCTA ATCGAAACAT TAACATACCG GTTCGGTGCT CACAGTTCAG CAGGTGATGA TCCTACTCGT TACCGGACTG AGGATGAAAC AAAGCCATGG TTTGATAAAG ATCCATTGAT TCGTCTTCGC AAGTACCTAA CGAAAAAGGG GCTTTGGTCT GAAGAAGAAG AACAAAAATA TGCTGATGAA TGCAAACAAA GCTTTAAAGA AGCAATGAAA GAAGCTGACT CAGTAGAACC TGAAAAAGTT AGCGATATGT TGAAACGGAC GTTTGAAGTA CCAACTCCAG ACATTAAAGA ACAAATTAAG AAGTACGAAG AAAAGGAGTC GAAGTAA
|
Protein sequence | MANTKAVNFA EIKANEGVPY AKPVQILDND GNVVNKELMA NFSDELLVDL MKKMVWERAL HEQTMSFSKQ GRLGFYAPTW GEEASEMGTA AAFKKQDFLF PAYRDLPQLI QHGATVAQMY LWSKGHIKGN LFDARALRPQ IIIGAQMVEM AGGALGIKKN GEKDTVAYAY TGEGGSSQGD TYEGMNFAGA FQVPGVFIIQ NNGWAISFPR KLQTEAQTIA QKAVAAGIPG VQVDGMDVLA CYEVAKEARE FAAAGNGPVL IETLTYRFGA HSSAGDDPTR YRTEDETKPW FDKDPLIRLR KYLTKKGLWS EEEEQKYADE CKQSFKEAMK EADSVEPEKV SDMLKRTFEV PTPDIKEQIK KYEEKESK
|
| |