Gene Lreu_0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0618 
Symbol 
ID5190166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp688604 
End bp689662 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content42% 
IMG OID640590453 
Productaspartate semialdehyde dehydrogenase 
Protein accessionYP_001271222 
Protein GI148543852 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAG AATATAATGT CGCAATTTTG GGTGCTACTG GTGCGGTTGG TACACGGATG 
ATTCAACAAT TGGAACAATC AACAATTCCG GTAAAGAGTG TGAAATTACT GGCATCCGCT 
AAGTCAGCTG GTAAGCAATT ATCATTTAAG GGTCAACCGA TCACTGTTGA AGAAACGACA 
CCTGATTCTT TTAATGGGGT TGATATTGTG CTTTCATCTG CTGGTGGATC AGTATCAAAA 
AAGTTCCTTC CAGAAGCAGT AAAACGGGGA GCAGTTTGTG TTGATAATAC GAGTGCTTTT 
CGAATGGAAC CTGATGTACC GCTAGTAGTT CCAGAAGTAA ATGAAGAGGC ATTAAAAAAT 
CATCACGGAA TCATTGCTAA TCCTAACTGT TCGACAATTC AAATGGTGGT AGCATTGGAA 
CCAATCCGCC AAGCATTTGG ATTGAATCAA ATTATTGTTT CGACTTACCA AGCAGCTTCA 
GGAGCAGGTC AATCAGCTTT AAATGAATTG CGACAAGAAA CTCAAGACTA CCTTGAGGGT 
AAGGACATGC AAGCAGATGC CAAGATTTTG CCAACAAAGG GTGACAAGAA GCATTATCCA 
TTAGCTTTTA ATTTATTACC GCAGATCGAT GTCTTTGAAG ATGATGGTTA CTCCCATGAA 
GAATGGAAGA TGATCCATGA AACAAAGAAG ATCATGTTAA ACGACATGGA CGCTAAGGAT 
ATTAAGGTTA CTGCCACTTG TGTTCGTGTA CCTGTCCCAA TTGCTCATGG AGAATCAATT 
TACTTTACTG TTGACGATCC AACGGTAACT GTTGACCAAT TGCGGGCAGT ATTAAAGGAC 
GCTCCCGGGG TAGTTCTGCA GGATGATCCT GCGCACCAGG TTTATCCTCA ACCAATTAAT 
GCTGTTGGCA AGCGTGACAC TTTTGTTGGT CGTCTCCGTG CAGATGAAGA AAATCCTGGT 
TCCTTTAATA TGTGGGTTGT TGCTGATAAT CTCCTTAAGG GGGCGGCTTG GAATACCGTT 
GAAAATGCAG AACGGTTAGT CGCAAATGGG TTAGTTTAA
 
Protein sequence
MSKEYNVAIL GATGAVGTRM IQQLEQSTIP VKSVKLLASA KSAGKQLSFK GQPITVEETT 
PDSFNGVDIV LSSAGGSVSK KFLPEAVKRG AVCVDNTSAF RMEPDVPLVV PEVNEEALKN 
HHGIIANPNC STIQMVVALE PIRQAFGLNQ IIVSTYQAAS GAGQSALNEL RQETQDYLEG 
KDMQADAKIL PTKGDKKHYP LAFNLLPQID VFEDDGYSHE EWKMIHETKK IMLNDMDAKD 
IKVTATCVRV PVPIAHGESI YFTVDDPTVT VDQLRAVLKD APGVVLQDDP AHQVYPQPIN 
AVGKRDTFVG RLRADEENPG SFNMWVVADN LLKGAAWNTV ENAERLVANG LV