Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0578 |
Symbol | |
ID | 5190103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 647399 |
End bp | 648427 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640590413 |
Product | 6-phosphogluconolactonase |
Protein accession | YP_001271182 |
Protein GI | 148543812 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2706] 3-carboxymuconate cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTGAAC AATTTCTAAT TGGAACTTAT ACTAAAAAAG CAAGTAAAGG GATCTATAAA GTTACCCTCG ATACTGCCCA AGAAAAAATA ACGAATGTTG AACTAGCAAT TCCATCTCAA AAGCCAGCTT ACTTACAAGT TGGTCAAGAT GATCGGATCT ACGCAATTAA ACAAGTAGAT GATAAGGGAG GAGTTGCCTC TTATTCATTA AGCGACGACA ATGCTAAGAT GTTAAGCGAT GTTTTAGCTG CCGGTGCCCC TCCTGCATAT GTTGGCGTTG ATAACAAACG GCATTTATTA TTCAGCGCTA ATTATCATAC AGCAAAAATA GATGTTTTTA AGATCAACGA AGATGGAACG TTGACACAAA CTGATTCTGT CCTTCATGAA GGAGCAACTG GTCCTGAACC TGAACAAGAG GCTCCACATG TTCATTATGC CGATCTAACT CCTGACAATC GTCTAGTTGT ATGTGACTTA GGAATGGATC TTGTTGTGGT TTACGATGTC TCTGATGATG GTAAATTAAC TGCTGTCTCT CGCTACAAGT GTGAAGATGG CTTTGGTACC CGTCATATAG CTTTCCATCC AAATGGTAAT TATGCTTATC TTTTAGGTGA ACTAAGCAGT AAACTAGAAG TACTCAAGTA TAATAGTAAC GATGCATCAT TTAAGCACCT TCAAACGCTC AAAACAATTC CTGAAGACTG GACAGCTCAC AATGGAGCAG CTGCTATCCG GATCTCAAAT GATGGTAAAT TTGTCTATAC TTCAAATCGT GGTGAAAACA CCATTGCCGT CTTTGAAGTC CAACCAGATT TTACCGTTAA ACATATTCAA TCAATTTCAA CTGAAGGAGA TTTTCCACGC GATTTCAATC TAAATCAAGA TGAAAATTAT CTTTTAGCTT CAAATCAGAA CTCTGATAAC CTTACGCTTT ATAAACGAAA TCCATCAACT GGTAAGTTAA CTCTTCTTCA AAAAGATGTT AGTTGTCCAG AACCAGTGTG TGTAATGAAG TGGAAATAA
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Protein sequence | MIEQFLIGTY TKKASKGIYK VTLDTAQEKI TNVELAIPSQ KPAYLQVGQD DRIYAIKQVD DKGGVASYSL SDDNAKMLSD VLAAGAPPAY VGVDNKRHLL FSANYHTAKI DVFKINEDGT LTQTDSVLHE GATGPEPEQE APHVHYADLT PDNRLVVCDL GMDLVVVYDV SDDGKLTAVS RYKCEDGFGT RHIAFHPNGN YAYLLGELSS KLEVLKYNSN DASFKHLQTL KTIPEDWTAH NGAAAIRISN DGKFVYTSNR GENTIAVFEV QPDFTVKHIQ SISTEGDFPR DFNLNQDENY LLASNQNSDN LTLYKRNPST GKLTLLQKDV SCPEPVCVMK WK
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