| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0574 |
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| Symbol | |
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| ID | 5189218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 638140 |
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| End bp | 639045 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640590405 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001271179 |
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| Protein GI | 148543809 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000115636 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTTA ATTGGATATA CGATCATCGC ACACCACGGA AATTACGATC GGCATTAAAA
ATGTATGGGG TTTCTTCTTC GTTATTAAAA GTAGCCATAT ACCATGGAGG AAAAATGCAA
ATAAACGGGG TAGATAAGTG GGCCGTTGAT ACTGTTAATT ACCTTGATAA GGTAACATTA
ATCCTCCCTC CAGAAACTGC TAATGATAAT GTGGATGTCA GTGAGGCACC TATCGATATT
ATTTATGAAG ACCAGGATTT TTTAATAATG AATAAGCCGG CAGGAGTAGC AACAGTTCCG
GCTCATAATG TTCCGGTAGC CGATAGTTTG GTGAATCGGG TAAAAGGCTA CTATAAGCGC
CAAAATTATG AAAATCAGGT TACCCATGTT GCGACACGTT TAGACCGTGA CACCAGCGGC
TTAGTTGTTT TTCCTAAACA CCGATTTGCT CACGCTGTCC TCGATGAACA GTTAAAAAAA
CATTTAGTTA AGAAAAACTA TCTTGCTCTA ATTAAAGGAA AAGTTCCTGC AGAGCATGGT
TATATTGATG CGCCGATTCA ACGCGATCCC AATTCATTTG TAAAAAGAAT GGTAGGGAAA
GAGGGGAAAG CATCTGTAAC TGAATACTGG CGCCAAGAAT GTAATGTTCA AGCAAGCCTC
ATCAAAATTA GGTTGCATAC AGGTCGGACA CACCAAATTC GCGTTCATTT TGCTAGTCTT
GGTTTTCCAT TAATTGGCGA TAAAATGTAT GGTGAAGAAT CAGGATTAAT TGCTAGACAA
GCGCTCCATT GTTATTGGCT AAGCTTTTAT AGTCCATTTA AAGGTAAAAA TATTACTGTT
TCGGCACCAT TGCCAAGTGA TTTCAAAAAC GCTAAAGATG ATCTTTTAAG TACAAAAAAT
TATTAG
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| Protein sequence | MKFNWIYDHR TPRKLRSALK MYGVSSSLLK VAIYHGGKMQ INGVDKWAVD TVNYLDKVTL
ILPPETANDN VDVSEAPIDI IYEDQDFLIM NKPAGVATVP AHNVPVADSL VNRVKGYYKR
QNYENQVTHV ATRLDRDTSG LVVFPKHRFA HAVLDEQLKK HLVKKNYLAL IKGKVPAEHG
YIDAPIQRDP NSFVKRMVGK EGKASVTEYW RQECNVQASL IKIRLHTGRT HQIRVHFASL
GFPLIGDKMY GEESGLIARQ ALHCYWLSFY SPFKGKNITV SAPLPSDFKN AKDDLLSTKN
Y
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