Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0565 |
Symbol | |
ID | 5189390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 623082 |
End bp | 623729 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640590372 |
Product | SNARE associated Golgi protein |
Protein accession | YP_001271170 |
Protein GI | 148543800 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000222667 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCAACTC TTATTGATTT TATACTACAT ATTGATATTC ATTTAATTCA GATTGTTAAT CAATTCGGTG ATGCGACCTA TTTAATTTTA TTTGCTATTA TCTTTATCGA AACTGGTGCA GTCATAATGC CCTTTCTACC TGGAGATTCC CTTCTCTTTG CTGCAAGTGC GCTAGCTGCT GACCCTCGTT ATCATCTTAA TATTTGGATT TTTATTTTCA TCTTCTTATG TGCCTGTTTG GGTGGAGACT CCCTTAACTT TTTAATTGGT CATAAGATTG GTAAAAGTCT TTCTAACCAT TCACTTTTTG GTAAATTGAT TGATAAAGAT AGTCTAGAAC GTGCCGAAGT CTTCTTTGAA AAGCATGGTG CACCGGCTAT TATTCTTGCC CGTTTTATTC CGATTATTAG AACATTTGCT CCGTTTGCGG CGGCAGGTTC AGGTTTTCCA TATAAGCAAT TTATTCGTTA TAGTGTAATT GGCTGTGTTG TATGGGTAGC GCTTTGCTGT GGATGTGGTT ACTTCTTCGG TAATCTTCCG TTCGTTCAAG AACACTTCTC TGTAATCATT CTTGCAATTA TTGTGGTTAC TTTAATTCCA GCAGTTATCG GAGCATTACG TTCGCGCTTT GTTAAAGAAG ATGCGTAA
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Protein sequence | MATLIDFILH IDIHLIQIVN QFGDATYLIL FAIIFIETGA VIMPFLPGDS LLFAASALAA DPRYHLNIWI FIFIFLCACL GGDSLNFLIG HKIGKSLSNH SLFGKLIDKD SLERAEVFFE KHGAPAIILA RFIPIIRTFA PFAAAGSGFP YKQFIRYSVI GCVVWVALCC GCGYFFGNLP FVQEHFSVII LAIIVVTLIP AVIGALRSRF VKEDA
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