Gene Lreu_0459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0459 
Symbol 
ID5189359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp514460 
End bp515233 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content39% 
IMG OID640590266 
ProductYibE/F family protein 
Protein accessionYP_001271064 
Protein GI148543694 
COG category[S] Function unknown 
COG ID[COG5438] Predicted multitransmembrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000110124 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAA TTACGGGCCT TGGCTTAGTA TTGTTAATTT TGATGGTCCT TGTGGGAGGA 
AAACAGGGCT GGACAGCTTT TTTAAGCTTG CTTCTTAATT TTGGCTTTTT ATATTTTGCA
ATTATTTTAG TCGCGTTTCA TGTCCCTCCG TTATTTGTAA CGGTGACTAT TGGGATTACA
ATTTTGGCAA TAACCATTTT CATGGGAGAG GATGATTTGC GGACAACCGT GACAGCCTTT
TATGCTTCCC TCAGCGTGTT ATGTTTAATT TTAGTGCTGA TCTTTATTGT CGAGCACTGG
GCAATGGTGC AGGGCTTTGG AACAGAAGAT AGCGATGAGT TAGAAGGAAT GTCAATTTTA
ATTGGAATTA GTTATTTCAA AGTTTCTGTT ACTACGACTA TTTTGAGTTC GCTCGGCGCA
ATTGCAGAAG CGGCAATGGC GATTTCCTCT GGCCTTACGG AAATCCTTGA GAATCATCCC
GAAAGAACTA ATCGTCAATT AATTCATAGT GGGATGGCAA TCGGGCAACA GATTATTGGA
ACAACATTTA ATACGCTTTT CTTTGGCTTC TTCGGTGGAT TCTTAGCACT ATTTATTTGG
TTCTTAGGTC TCCACTATTC CTTTGGTACA ATTATGAATA ATAAAATTTT TGTGGCAGAA
ATGATTGAAA TTCTGATCTC TTTCATTGGG GTGCTGATCA CTGTTCCCAT GACCGCTTGG
GTGATGACAA AGCGGCGTAA ATCAGTTATT GACAATCATC CTAAAACAAA GTAA
 
Protein sequence
MTTITGLGLV LLILMVLVGG KQGWTAFLSL LLNFGFLYFA IILVAFHVPP LFVTVTIGIT 
ILAITIFMGE DDLRTTVTAF YASLSVLCLI LVLIFIVEHW AMVQGFGTED SDELEGMSIL
IGISYFKVSV TTTILSSLGA IAEAAMAISS GLTEILENHP ERTNRQLIHS GMAIGQQIIG
TTFNTLFFGF FGGFLALFIW FLGLHYSFGT IMNNKIFVAE MIEILISFIG VLITVPMTAW
VMTKRRKSVI DNHPKTK