| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0447 |
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| Symbol | |
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| ID | 5190050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 500206 |
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| End bp | 501627 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640590254 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001271052 |
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| Protein GI | 148543682 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000329261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGAAC AAAAGAAAGG TATTGGTAGA GGCGAATTGA TCGCCTTAAT TGTAAGTTCA
TGTATCGGTA CCGGAATATT TGGTATTACT AGTGATGTGG CAGCGGCGGC GGCACCAGGT
CCTGCCCTGT TAGCTTGGAT TTTTGTTGGA ATTGGTTTTT TGATGTTAGT TCTCTCGCTA
AATAATTTAT CTGAAAAGCG ACCAGATCTT ACTTCAGGGA TTTTCTCATA TGCTGGTGCC
GGTTTTGGGC CATTAGGTGA ATTTATTTCT GGATGGTCTT ACTGGTTATC CGCATGGCTG
GGAAATATTG CTTTTGCCAC CATGTTGATG AGTTCAATTG GAACGTTCTT CCCAACCTTT
AAAGGTGGTC AAAATTTACC ATCGATTATT ATTGCCATCA TCTTCTGTTG GCTATTAACA
ATCTTAGTTA ACAATGGTGT TGAAAGTGCA TCTTTTGTTA ACATGATTGG AACAATCTGC
AAGGTTTTAC CATTAGTTAT CTTTATTATT ATGATGGTTG TTTGCTTCAA GGCTGGGATG
TTCACAGCAG ATTTCTGGGG CCGAGTTGCC AATAATGCTT CTCACGGCAC TACAACTGGG
TCTGTTTGGG AACAAATGAA AGGTACCCTA ATGACCTTAA TTTGGGTATT TATCGGTGTT
GAAGGTGCTT CTGTTATGGC AAGTCGGGCA AAGTCCCTTA CAGCCGCTCG TGAAGCTTCT
CTCATCAGTT TTGGTCTTTT AGTAGTTATC TATGTATTAA TTTCAATTTT ACCTTATGGT
GCATTAACTC GGGCAGAATT AGCCGGCATG GGACAACCAG CTATTGGTCA TGTTCTTCAA
GCAACCGTTG GTAGTTGGGG CTCAATTTTA ATCAATGTTG GTTTAATCAT CTCAACAATT
GTTTCCTGGC TTTCTTGGAC AATGCTCCCA GCCGAAACAA CAATGTTAGT TGCCGATGAT
AAGGCAATGC CAAAAATCTG GGGAAAGGTT AATGCCAAAA AAGCACCAAC TGCTTCCTTG
ATGATTACAG CGGTATTGCA AACAATCTTC TTGTTCTCAT TGCTTTTCAC TGATAAAGCC
TATGAATTCG CATATTCCTT ATGTAGTGCA GCAATTTTAT TCTCATACTT ATTTGTTGGA
CTTTACCAAA TGAAATACAG TTCTGCACAC CAAGAATGGG GACAATTTAC AATTGGTTTG
CTCTCTGCTG CATTCATGTT CGCATGTATG TTCCTTGCTG GATGGCAAGA AGTCTTATTA
GTTTCAATTA GTTTTATTCC TGGATTCTAC ATTTACTACT TAGCATGTAA AGAAAATAAT
CGTAAAGTTA CAACTGCTGA AAAGTGGACA ATGGCGCTAA TTTTAATCCT AAGTGTTATT
GCAATTTGGC TTGTTGCTAA TGGAACTATT GCCATCGGCT AG
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| Protein sequence | MDEQKKGIGR GELIALIVSS CIGTGIFGIT SDVAAAAAPG PALLAWIFVG IGFLMLVLSL
NNLSEKRPDL TSGIFSYAGA GFGPLGEFIS GWSYWLSAWL GNIAFATMLM SSIGTFFPTF
KGGQNLPSII IAIIFCWLLT ILVNNGVESA SFVNMIGTIC KVLPLVIFII MMVVCFKAGM
FTADFWGRVA NNASHGTTTG SVWEQMKGTL MTLIWVFIGV EGASVMASRA KSLTAAREAS
LISFGLLVVI YVLISILPYG ALTRAELAGM GQPAIGHVLQ ATVGSWGSIL INVGLIISTI
VSWLSWTMLP AETTMLVADD KAMPKIWGKV NAKKAPTASL MITAVLQTIF LFSLLFTDKA
YEFAYSLCSA AILFSYLFVG LYQMKYSSAH QEWGQFTIGL LSAAFMFACM FLAGWQEVLL
VSISFIPGFY IYYLACKENN RKVTTAEKWT MALILILSVI AIWLVANGTI AIG
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