Gene Lreu_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0417 
Symbol 
ID5189535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp470461 
End bp471948 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content38% 
IMG OID640590223 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001271023 
Protein GI148543653 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000648211 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA TGTATCGGTT GATGCTTTCA TTTTTTGCGA TTATTTTGAC GCTAATGGTG 
ATTGTTAGTA TTTCGTTTAT CAATGTGACT AACAACACTA TGTATCACAA TACGTGGCAA
CAATTGAAAA GTTATTCTGA TAGTTTAATT CAGGATTCTA TTCGTTACAA TATGGCAACC
CAAAGTTTTG AAGGGTTTGC TACAGAATCA TTAAATAGCA ATGCCAATCT TTTAACACGT
CAAAATGTCC ACTTTGCGAT TTACGATACA ACTCACCGGA AAATCTTTGC CAGTAATGGA
TTTGCTCCTA GTATGAGTAA AAGTGATTGG AAAAAATTAA AAAAAGGAGA AACCGTTTGT
ACTAAGCTAA TTACTCCTAA AATTAATTCA CGAGTATCGA AGGGTGCTTC TCCACGAATG
ACCGAAGTTT CACGACCATA TTTCTATAAG GGGAAGATGA TTGCGGTAGT ATCAATTGCA
ACCTTTGTAT CGACGATTGA GCAAAATATG CATCAAATAA AGATTAACTT AATAATGGCA
TTACTGACTG CTAGTCTTGT AACGCTTGCA GTTAGCTACT TCTTGGCACG GTCAATTACC
AAACGAATTG ATCGATTGCG GATGGCTACT CACCAAATTG CGCAAGGAAA TTACAATGTT
GAAGTGGACG ATAATGGGCG TGATGAAGTG GCAGACCTTG GTCGGAGTTT TAACCAAATG
ACCGCTTCGT TACGTGAATC GCAACAAGAA ATTCGCCGGC AAGAGGAGCG GAGACGCCAA
TTTATGGCTA ATGCAGCCCA TGAAATGCGG ACGCCATTAA CAACCATTAA TGGAATTCTT
GAAGGATTAC AGTATGATGC GATTCCAGAA GAGGATAAAA AGCATAGTAT CCAGTTAATG
CAAAATGATA CGCGGCGTTT AATTCGCTTG GTCAATGATA ATTTGGATTA TGAAAAGATT
CGCACTAACC AAATTGCGAT GGAACGGAAA GTATTTGATG CATCGGCAGT ACTCGAAAAT
TTACGAGAGC AGTTAGCGAA AAAGGCAAAA GAGAAAAAGG ATACTCTGCA CTTGGATGTA
GAAAAGAATT TACGGGTATA TGCAGACTAT GATCGGTTTG TACAGATTAT GTTCAATATC
ATTCAAAACG CAATCCAATT CACTGATAAC GGAATTATTG ACATTCGAGG AAAACGTGTG
GAAAAGGGAA GTCAATTTGA AGTTCAAGAT AATGGAATTG GGATGACTCC TGAACAACTT
GAAAATATCT GGGAACGATA CTATAAAGCT GATCGTTCAC GGATGAATAC TAAGTACGGA
GAATCTGGCT TAGGACTCGC AATTGTGCGG CAGTTAGTTC TTCTTCATGG CGGAAAAATT
GACGTAAAAA GTCAGTATGG TAAGGGGACG ACATTTACAA TCTTTTTCCC TGATCGTGAA
TACGCTCCGC ATAATATTCA ACCTACAAAT AATAAAGACA AAAAGTAA
 
Protein sequence
MKLMYRLMLS FFAIILTLMV IVSISFINVT NNTMYHNTWQ QLKSYSDSLI QDSIRYNMAT 
QSFEGFATES LNSNANLLTR QNVHFAIYDT THRKIFASNG FAPSMSKSDW KKLKKGETVC
TKLITPKINS RVSKGASPRM TEVSRPYFYK GKMIAVVSIA TFVSTIEQNM HQIKINLIMA
LLTASLVTLA VSYFLARSIT KRIDRLRMAT HQIAQGNYNV EVDDNGRDEV ADLGRSFNQM
TASLRESQQE IRRQEERRRQ FMANAAHEMR TPLTTINGIL EGLQYDAIPE EDKKHSIQLM
QNDTRRLIRL VNDNLDYEKI RTNQIAMERK VFDASAVLEN LREQLAKKAK EKKDTLHLDV
EKNLRVYADY DRFVQIMFNI IQNAIQFTDN GIIDIRGKRV EKGSQFEVQD NGIGMTPEQL
ENIWERYYKA DRSRMNTKYG ESGLGLAIVR QLVLLHGGKI DVKSQYGKGT TFTIFFPDRE
YAPHNIQPTN NKDKK