| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0385 |
|---|
| Symbol | |
|---|
| ID | 5189628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 437157 |
|---|
| End bp | 438518 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640590190 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_001270991 |
|---|
| Protein GI | 148543621 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000000859435 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCTAATA TTAAGAATGG AGGAATGATG ATGAATCAAC AGCCAACAGA TGAATTAAAA
AGGTCGCTTG GATTCTGGTC CGCTATTTCG ATTGTTATTG GGACAATTAT TGGATCGGGA
ATATTCTTTA AACAAGGATC TGTTCTTGAT AGTGCTGGTA CATCTACTCT TGCAATAGCA
GCCTGGGTAT TTGGAGGAAT TATTACTTTA ACTGGTGGAT TAACAGTGGC GGAAATTGGT
GCCCAAATGC CATATACTGG GGGACTATAT GTCTATATTG AAAACTTGTA TGGCCGCCTT
TTAGGATTTT TAGCCGGGTG GATGCAAGTA ATTGTTTATG GGCCAGCAAT TATTGCTTCG
GTTGCCGGAT TTATGAGTAT TTTAATGGCA AACTTCTTTG GTTTAGGAAC CCAGTGGCGG
ATACCTTTAG CAGTGATTAC AGTGATTGCC ATTGGCGTAA TGAACCTTTT TGAAAATAAA
GTTGGCGCAA TTTTTTCGAT TATCACGACT GCTGGAAAAA TGATTCCAAT TGCGGCAATT
ATTATCTTTG GTTTGTTCTG GGGGCATCAA GATGCTTTTG GTCAAACGGT TACCGAAATT
CACCAATCAA CTGGTGGGTT TGGGGTAGCA GTTTTAGCAA CCTTATTTGG TTATGATGGT
TGGATTTTAA TCGCAAACCT TGGGGGAGAA ATGAAAAATC CCCAAAAATT ATTGCCACGA
GCTATTATTT TAGGGATTAC TGCTGTTCTT ATTATTTATA CTTTAATTAC TGTTGGGATT
TTGAAGTTCC TTCCAGTTAA CACTATTCAT CGGCTAGGCG AAAATGCAAC TGCATACTTA
GCAGTGAAAG CTTTTGGAGC AATTGGAGGA AAACTGCTGT CAGCCGGAAT TATTATTTCG
ATGATGGGGA CTTTAAACGG GAAAATGATT ACTTTTCCCC GGATTGTATA CGCAATGGCG
CGTCGTCATG ATTTGCCATT CTCACGCTAT CTCGCATATA TCACGCCAAA GGGTAAGTCA
CCAGTAGTCG CAACGATGTT TATTATCATT CTTGCAACGA TTATGATGTT CTTCTTTGAC
CCTGATCACT TGTCAGATTT GTGTGTGTTT ACTGTTTATT GTTTCTATCT TTTAGCATTC
TTTGGGATCT TCATTTTAAG ACATAAGAAT AAGGGACCGC GCCCATTTAG CACACCGCTT
TACCCCTTAG TGCCAATTAT TGCAATTGCT GGTGGAATCT TTGTCCTCGT AAGTGAAGTT
ATGAATGATC CAGCTGGTGT AATTCTTTTT ATCGGAATCG TCATTGTAGG ATTGCCAATC
TTATATATTG TTAAACGAAT GGATCAACGA CGGATGCATT AA
|
|---|
| Protein sequence | MPNIKNGGMM MNQQPTDELK RSLGFWSAIS IVIGTIIGSG IFFKQGSVLD SAGTSTLAIA
AWVFGGIITL TGGLTVAEIG AQMPYTGGLY VYIENLYGRL LGFLAGWMQV IVYGPAIIAS
VAGFMSILMA NFFGLGTQWR IPLAVITVIA IGVMNLFENK VGAIFSIITT AGKMIPIAAI
IIFGLFWGHQ DAFGQTVTEI HQSTGGFGVA VLATLFGYDG WILIANLGGE MKNPQKLLPR
AIILGITAVL IIYTLITVGI LKFLPVNTIH RLGENATAYL AVKAFGAIGG KLLSAGIIIS
MMGTLNGKMI TFPRIVYAMA RRHDLPFSRY LAYITPKGKS PVVATMFIII LATIMMFFFD
PDHLSDLCVF TVYCFYLLAF FGIFILRHKN KGPRPFSTPL YPLVPIIAIA GGIFVLVSEV
MNDPAGVILF IGIVIVGLPI LYIVKRMDQR RMH
|
|---|
| |