Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0334 |
Symbol | |
ID | 5188996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 378452 |
End bp | 379318 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640590140 |
Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
Protein accession | YP_001270941 |
Protein GI | 148543571 |
COG category | [R] General function prediction only |
COG ID | [COG0313] Predicted methyltransferases |
TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
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Plasmid Coverage information |
Num covering plasmid clones | 68 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCAAA TTAGTAGTTT TAATGATCAC CAATCAGGAA GTTTATATTT GGTTCCAACC CCAATTGGAA ATTTAGATGA TATGACTTTC CGTGCAATTA AAACCTTAAA AGAAGTGGAT CTGATTGCTG CTGAAGATAC ACGTCATACT CAGCAACTAT TAAACCATTT TGATATATCG ACCCGTCAAA TTAGTTTTCA TGAGCATAAT ACTGAACAAC GTGTTCCGGA ATTAATTGAG AAATTAAAAG CTGGTTATTC GATTGCCCAG TGTAGCGATG CGGGGATGCC TTCGATTTCT GACCCCGGCA AGGAATTGGT AGCGGCGGCA GTTAGAGAAG GATTGCCAGT AATTCCGCTT CCAGGAGCTA ATGCAGGATT GACGGCTCTT ATTGCTTCGG GGTTAGTTCC CCAGCCGTTC TACTTCTTTG GCTTTTTAGA GCGTAAACAC CAGCAGCAAG TAACAGCACT GGAGCAATTG AAAGAGCGTA AAGAAACGAT GATCTTTTAT GAAGCTCCAC ACCGCTTAAA AAAGACTTTA GCTACGATGG CGGAAGTTTT CGGCAATGAA CGGCGAGTTG TATTAGCACG GGAACTCACT AAACGCTATG AAGAGTTTAC CCGGGGAACG CTTGCTGAAG TAACTGCCTG GTTTGAAGAT CACCAACCAC GAGGCGAATT CGTTATTCTG GTAGCAGGGA ATGAGCACCC CACAGAGAAG ACGGATAATG AGATTGAATT ACCATTAACA GAGCAGGTTG ATAAGGAAAT TTTAAATGGC CTTTCCACTA ATGCTGCGAT TAAGCTGGTG GCAAAGAAAA ATAATATAAA ACGCCAGGAA TTATATAAAC AATATCATCA ATTGTAG
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Protein sequence | MQQISSFNDH QSGSLYLVPT PIGNLDDMTF RAIKTLKEVD LIAAEDTRHT QQLLNHFDIS TRQISFHEHN TEQRVPELIE KLKAGYSIAQ CSDAGMPSIS DPGKELVAAA VREGLPVIPL PGANAGLTAL IASGLVPQPF YFFGFLERKH QQQVTALEQL KERKETMIFY EAPHRLKKTL ATMAEVFGNE RRVVLARELT KRYEEFTRGT LAEVTAWFED HQPRGEFVIL VAGNEHPTEK TDNEIELPLT EQVDKEILNG LSTNAAIKLV AKKNNIKRQE LYKQYHQL
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