Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0330 |
Symbol | tmk |
ID | 5189072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 376070 |
End bp | 376711 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640590136 |
Product | thymidylate kinase |
Protein accession | YP_001270937 |
Protein GI | 148543567 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGGTA AATTTATATC ATTTGAAGGA CCAGATGGCG CGGGTAAGAC AAGTGTAATC CAACAGATCC AACTGGAATT GGAAGATCAG CTTGGCACAG AAAAAGTTAT GTATACTCGT GAACCTGGTG GTAATAAGAT CTCTGAGCAA ATTCGCCAGG TACTGTTTGA TGGTCAAAAT ACCGATATGG ATGGGCGGAC AGAAGCATTG CTTTTTGCTG CTGCTCGTCG GCAACACATT GTTTCAGAAA TAATTCCGGG GCTGAAAGCA GGCAAAGTTA TTCTGTGTGA TCGATTTGTA GATAGTTCCA TTGCTTATCA GGGAGCTGGT CGGGGCCTTG GAGAAAAAGA AATTTGGCAA ATTAATCAGT TTGCGATTGA TGGGCTAATG CCGGCGTTGA CAATTTATCT TGATATTGAA TCAGAAATTG GCTTAAAACG GATTGCTGAG CATCGTTCCA ATCAAGTTAA TCGATTAGAT GAAGAAAAAC TTGAATTTCA TCGAACTGTT CGTCAATCTT ATTTAAAACT CTACCAGAAT TATCCAGAAC GAATAGAGTT GATTGATGCA AGCCAGCCAT TGGAAAAAGT GATTGAGGAC GTAAAAGCAA CAATTCATGA CCGGTTTTCA GATTTGTTTT AA
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Protein sequence | MDGKFISFEG PDGAGKTSVI QQIQLELEDQ LGTEKVMYTR EPGGNKISEQ IRQVLFDGQN TDMDGRTEAL LFAAARRQHI VSEIIPGLKA GKVILCDRFV DSSIAYQGAG RGLGEKEIWQ INQFAIDGLM PALTIYLDIE SEIGLKRIAE HRSNQVNRLD EEKLEFHRTV RQSYLKLYQN YPERIELIDA SQPLEKVIED VKATIHDRFS DLF
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