Gene Lreu_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0325 
Symbol 
ID5189613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp372252 
End bp372764 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content39% 
IMG OID640590130 
ProducttRNA-adenosine deaminase 
Protein accessionYP_001270932 
Protein GI148543562 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00296157 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA ACAATTCATC ATTATCTGAA CAACAAAAGT TTATGAAGAT GGCGATTGCA 
GAAGCAAAAC AAGCCAGAAT TTTAGATGAA GTACCAATTG GTGCGATTGT TGTCCACGAT
GGACAGGTAA TTGGACGTGG TCATAATATG CGTGAAAAGT TTCAAGATGT TACCTATCAC
GCAGAAATGC TTGCAATTAT GGAAGCATGC ACGAATTTAG GGAGTTGGCG CTTAGAAGAT
TGCGACTTGT ATGTTACGTT AGAACCGTGC ATCATGTGTA GCGGTGCCAT TATCAATGCA
CGGATAAAAA ATGTTTATTA TGGTGCCGCT GATCCGAAAG CAGGGGCAGT TGATAGCTTA
TATCATTTAC TAAGTGATTC ACGTTTAAAT CATCAAGTCA ATGTTCATTC TGGTATTTTA
GGGGATGAGT GTAGCCAAAT GTTAAAAAAC TTTTTCCGTG AAATTCGCCG TCGTCGGAAA
GAGGCTCGAA GAAAAAATAA GACTAACCTC TAG
 
Protein sequence
MKKNNSSLSE QQKFMKMAIA EAKQARILDE VPIGAIVVHD GQVIGRGHNM REKFQDVTYH 
AEMLAIMEAC TNLGSWRLED CDLYVTLEPC IMCSGAIINA RIKNVYYGAA DPKAGAVDSL
YHLLSDSRLN HQVNVHSGIL GDECSQMLKN FFREIRRRRK EARRKNKTNL