Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0310 |
Symbol | |
ID | 5189759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 356831 |
End bp | 358024 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640590115 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001270917 |
Protein GI | 148543547 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000040274 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAT TTAAATATTC AAAGCGTGTT CCAGCAGATG GTACGGATGC GGTTGGTGCA ATTTTACAAG CAGCGGCGGA TCCTAAGATT ATTTCATTTG CTGGGGGATT GCCGGCACCC GAATTGTTTC CTGTTAAAGA AATGAAAGCA GCTGTTGATA AGGTTTTTGA AGAACACGGT CAAGAAGCGA TGCAGTACGG AGCGGCGAAG GGAGTCACAG CTTTACGTGA AGTTATCCAA CAACATGTAA AGGAAAAAGA AAATGTGGAT TCCGAATTAG ACAATGTTTT AGTAACAACG GGATCAGAAC AAGCCTTAGA TTTAGTGGGC AAGGCTTTTG TTGACCCGGG TGATACTGTA TTAGTTGAAC AACCAACGTA CCTGTGTGCT TTAGATGTTT TTCGTTCTTA CGGTGCTAAT TTTGCTAGTG TTGAGATGGA TGAAGATGGG ATGAAGATGG ATGCTTTAGA AGAAGCACTA AAGGCTAATC CAAATACTAA GCTCATCTAT ACTGTGCCAA ACTTCCAAAA TCCAACTGGA CGAACAATGA CTGAAGAACG ACGAAAGCAG TTAGCTGAAT TAGCAGAAAA ATACGATGTA TATGTACTAG AAGATAATCC ATATGGTGAA ATTCGTTTTG CTGGCCAACA TGTACCAGCA GTTAAGTCAT TTGATAAATC AGGCCATGTC TTTTACATGA GTACATTTTC AAAGACGTTA GCCCCAGGAT TTCGTTTAGG ATGGTTGGTT GCTGATAAAG CTGTAGTTAA TAAATTAACG GTTCTTAAGC AATCAGCTGA CCTCCATACA GATAACTTAG CTCAATTCGC GGTTGCCCAA TTCTTTGCTG ATAACGATGT GGATGCTCAC GTTAAAGAAA TTAGTGCTTT ATACGGCAAA CGTAAAGATT TGATGCTTGA GGGAATTAAA AAATATTTCC CAGAAGGAGT TAAATATACG GATCCTGAAG GTGGCATGTT CTTGTGGGTA GAAGTTCCTG GTGTTGATGA TACAGTAGAG TTATTTAAGG AATGTCTTGA ACATGATGTA GCCTTTGTTC CAGGTGATCC GTTCTTTGCT GGTGAAGTTC AACCTGGTGC TTTCCGTTTG AACTATTCAA ATATGAAAGA AGACCAGATT GAAGTTGGTT TGAAACGTTT AGGAGCGGCT TTAACAGCTG CAGTTAATAA GTAA
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Protein sequence | MTQFKYSKRV PADGTDAVGA ILQAAADPKI ISFAGGLPAP ELFPVKEMKA AVDKVFEEHG QEAMQYGAAK GVTALREVIQ QHVKEKENVD SELDNVLVTT GSEQALDLVG KAFVDPGDTV LVEQPTYLCA LDVFRSYGAN FASVEMDEDG MKMDALEEAL KANPNTKLIY TVPNFQNPTG RTMTEERRKQ LAELAEKYDV YVLEDNPYGE IRFAGQHVPA VKSFDKSGHV FYMSTFSKTL APGFRLGWLV ADKAVVNKLT VLKQSADLHT DNLAQFAVAQ FFADNDVDAH VKEISALYGK RKDLMLEGIK KYFPEGVKYT DPEGGMFLWV EVPGVDDTVE LFKECLEHDV AFVPGDPFFA GEVQPGAFRL NYSNMKEDQI EVGLKRLGAA LTAAVNK
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