Gene Lreu_0288 details

Gene Information

• Locus tag: Lreu_0288
• ID: 5188991
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: +
• Start bp: 335463
• End bp: 337349
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640590093
• Product: glycoside hydrolase family protein
• Protein accession: YP_001270895
• Protein GI: 148543525
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3250] Beta-galactosidase/beta-glucuronidase

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000000148878
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGCAG ATATCAAATG GCTTGATGAA CCGGAAACAT TCCGCGTCAA TCAATTACCT 
GCTCATAGTG ACCATTATTA TTACGGTAAC TATGATGAAT GGCGGCATAA TAATAGTCGT 
TTTGCGCAAA ACTTGGATGG TCAATGGCAA TTTAACTTTG CTGAAAACCC GCGTAAACGA 
GAAAATGACT TTTATAAGGT AGATTATGAT AGTAGTAGTT TTGGAACAAT CGAAGTGCCT 
AGTGAGATTG AACTAAATAA TTACGCCCAA AATAATTACA TTAACACTTT GATTCCGTGG 
GAAGGTAAGA TTTACCGTCG TCCCGCATAT GCCCTTAGTC CTGATGATGC GCAAGAGGGA 
TCATTTAGTG ATGGGGATGA TAATACTGTT GGCGAATACT TAAAACATTT TGACCTTGAA 
CCTTCTTTAC GGGGAAAGCA GATCCGCATT CGTTTTGATG GTGTTGAGCG TGCCATGTAT 
GTTTGGCTTA ATGGTCACTT TATTGGTTAC GCTGAAGACA GTTTTACCCC CTCTGAATTT 
GACCTGACTC CTTACATTCA AGATGAAGGT AATGTTTTAG CTGTGGAAGT TTTCAAGCAT 
AGTACCGCCT CGTGGATTGA GGATCAAGAT ATGTTCCGTT TTTCTGGAAT TTTCCGGAGT 
GTAAACTTAT TAGCCCAACC ACTTGTTCAT GTTGAAGACC TTCATATTCG GCCAATTGTT 
ACTGATAATT ATCAGGACGG TATTTTTAAT GTTGACCTTC AACTTCACGG TGAAAAGACC 
GGGAACGTTA ATGTGCGGGT TATCGACAAT GATGGTAATA CGCTCGTCAA TGAAACACAC 
CCTGTTGATT CCACGGTAAA AGTTCAGGAT CAATTTTTAG AAAATGTTCA CTTATGGGAT 
AACCATGATC CTTACCTCTA TCAATTGTTG ATTGAAATTC GTGATGACGA AGGTAATTTG 
GTCGAACTCG TTCCATATCG TTTTGGTTTT CGGCGAATTG AAATTAATAA AGATCATGTT 
GTCCTATTGA ATGGTCAACG GCTAATTATA AATGGTGTTA ACCGTCACGA ATGGAATGCT 
AAACGTGGCC GCGCGATCAC GATGGATGAT ATGACGAGTG ATATTCACAC CTTTAAGGAA 
AATAATATTA ATGCCGTCCG GACGTGTCAC TATCCAGACC AGATTCCGTG GTATTACCTT 
TGTGATGATA ACGGAATTTA CATGATGGCC GAAAATAATC TGGAATCCCA CGCTACCTGG 
CAGAAGATGG GAGCAATTGA ACCATCATAT AACGTCCCTG GTTCAGTTCC TCAATGGCGT 
GACGTAGTAG TAGATCGGGC GCGGACTAAC TATGAAACAT TTAAGAACCA CCCGTCGATT 
TTATTCTGGT CGTTAGGTAA TGAATCATAT GCTGGCGATA ATATTGTCAA AATGAATGAA 
TTCTATAAGA AGCATGATGA CAGTCGGCTT GTTCACTATG AGGGTGTTTG TCATACTCCC 
GAATACCGTG ATCGGATCTC AGACGTTGAA AGCTGGATGT ACTTACCACC TAAAGAAGTT 
GAGGAGTACT TGAAGAACAA TCCAGACAAG CCATTTATGG AATGTGAGTA CATGCATGAT 
ATGGGGAACT CTGATGGTGG AATGGGTTCA TACATTTCTT TACTTGATAA ATACCCACAA 
TACTTTGGCG GCTTCATTTG GGACTTTATT GATCAAGCCC TCCTTGTTAA GGATCCGGTA 
AGTGGGCAAG AAGTGATGCG CTATGGTGGT GATTTCGATG ATCGTCACTC AGATTACGAA 
TTCTCGGGAG ATGGCTTGAT GTTTGCTGAT CGGACACCGA AGCCAGCAAT GCAGGAGGTA 
AGATACTACT ATGGCTTACA CAAATAA 

 

Protein sequence

MDADIKWLDE PETFRVNQLP AHSDHYYYGN YDEWRHNNSR FAQNLDGQWQ FNFAENPRKR 
ENDFYKVDYD SSSFGTIEVP SEIELNNYAQ NNYINTLIPW EGKIYRRPAY ALSPDDAQEG 
SFSDGDDNTV GEYLKHFDLE PSLRGKQIRI RFDGVERAMY VWLNGHFIGY AEDSFTPSEF 
DLTPYIQDEG NVLAVEVFKH STASWIEDQD MFRFSGIFRS VNLLAQPLVH VEDLHIRPIV 
TDNYQDGIFN VDLQLHGEKT GNVNVRVIDN DGNTLVNETH PVDSTVKVQD QFLENVHLWD 
NHDPYLYQLL IEIRDDEGNL VELVPYRFGF RRIEINKDHV VLLNGQRLII NGVNRHEWNA 
KRGRAITMDD MTSDIHTFKE NNINAVRTCH YPDQIPWYYL CDDNGIYMMA ENNLESHATW 
QKMGAIEPSY NVPGSVPQWR DVVVDRARTN YETFKNHPSI LFWSLGNESY AGDNIVKMNE 
FYKKHDDSRL VHYEGVCHTP EYRDRISDVE SWMYLPPKEV EEYLKNNPDK PFMECEYMHD 
MGNSDGGMGS YISLLDKYPQ YFGGFIWDFI DQALLVKDPV SGQEVMRYGG DFDDRHSDYE 
FSGDGLMFAD RTPKPAMQEV RYYYGLHK