| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0280 |
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| Symbol | |
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| ID | 5189856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 325354 |
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| End bp | 326754 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640590084 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001270887 |
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| Protein GI | 148543517 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000040332 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAA AAAACTATTC ACGTATTTAT CTCGCAATTG GTTCCCTTGC ATTACTAACG
TTTATCGGAA TTTTGAATGA AACATCGATG AACGTCACAT ATCCAGAATT ATCTGCTCAG
TTTAATGTAT CGCTCGATGT TATTCAGTGG ATTACAACTG GTTATTTATT GATGGTAACA
ATTACGATGG GGACGACTGC CTATCTATTA CGCCAGTATC AAGCACGCTG TTTGCACTTA
TTTGCAGTAT CATTTTTCAT TATTGGTGAC TTGATGTGTG CTTTGACTGG TAACTTTCCT
ATTTTGTTAA CGGGGAGATT GATTCAAGCA ATTGCTACTG GGTTAGCAAC GCCAATTATG
TTCCATTTAA TTTTTACGGA GATTCCGCGT GAAAGAATTG GCATGATGAC CGGAATGGCT
GCAATGGTTA TTTCGTTTGC GCCAGCGTTG GGACCAACAT ATGGTGGGGT CGTTTCAGAA
ATGCTATCAT GGCGGATGAT CTTTTGGATT TTACTACCAA TTGTTTTGAT TAGTCTTGTA
TGCGGTCAAC TTTTTATTCG TAATAAACCG CTTGGAAATG ATAAAGCATT TAGTTATGGA
AGCTTAATTA CACTGGCAAT TGCCCTTATT AGTATAATTA GTGCAGTTTC TTCAATTGGG
AAACAAGGAT TTGGAAAGCA GTTTTGGCTT TTATTATTGG TAGCAATTAT TTTCTTTAGC
GCCTTTATCT ATATCAATAA TCATGGTAAA TCAGAATTGT TTGACTTAAG GGTGTTTAAG
GTTGTCCCAT TACGGCTATC AACTGTCACT TATTTTAATT TACAGTTTAT TAATATTGGA
ATTTCGCTTG TTATTCCTAT TTACGTTCAA TATGTTTTGC ACTCTTCGGC AATTGTCGCG
GGTCTTATTT TATTTCCCGG GTCATTAATC GGTGCTTTTA TCTCGCCATT TGCTGGAACT
TTGGCTGATC GTTATGGTTT TGCTACGCCA GTTATTTCTG GGGGAACTCT TTTGGTTATT
GGGACAAGTT GCTTCAGTAT TTTCCAACGT CATTTAACGC CATTACTAAT AACGATCTTC
TTTGTTATTT TGCGAATTGG ATTTAACTTT GCCTTTTCTA ATACGATTTC CAATGCCTCA
ATGTTAGTTC AACCGCAAAA TGCCCCCGAT GTAAACTCAA TCTTTAATAT GGTCCAACAA
TTTGCCGGCT CACTGGGAAC TAGTCTTCTG GCCTCCACAA TTGCTTTATT CCAAATGAGC
AACAGCGGTT CACTGATGGG ACGTACGTAC GCCGGAGGAC GATTTGATTT TATCTTATTG
GGCGTTTTAG CAATCGTTAC TTTATTAACA ATGGTTACTA ATTATCGCAT GCAACAAAAG
AAGGAAAGTA TTTCTCAATA A
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| Protein sequence | MAEKNYSRIY LAIGSLALLT FIGILNETSM NVTYPELSAQ FNVSLDVIQW ITTGYLLMVT
ITMGTTAYLL RQYQARCLHL FAVSFFIIGD LMCALTGNFP ILLTGRLIQA IATGLATPIM
FHLIFTEIPR ERIGMMTGMA AMVISFAPAL GPTYGGVVSE MLSWRMIFWI LLPIVLISLV
CGQLFIRNKP LGNDKAFSYG SLITLAIALI SIISAVSSIG KQGFGKQFWL LLLVAIIFFS
AFIYINNHGK SELFDLRVFK VVPLRLSTVT YFNLQFINIG ISLVIPIYVQ YVLHSSAIVA
GLILFPGSLI GAFISPFAGT LADRYGFATP VISGGTLLVI GTSCFSIFQR HLTPLLITIF
FVILRIGFNF AFSNTISNAS MLVQPQNAPD VNSIFNMVQQ FAGSLGTSLL ASTIALFQMS
NSGSLMGRTY AGGRFDFILL GVLAIVTLLT MVTNYRMQQK KESISQ
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