| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0244 |
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| Symbol | |
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| ID | 5189382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 279389 |
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| End bp | 280885 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640590040 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001270851 |
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| Protein GI | 148543481 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0681922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGTTTA GTGAATTAGG CTTATCCGAT AGCCTATTAA AAGCAATCAA ACGGAGCGGA
TACGAAGAAG CAACACCAAT CCAAGAACAA ACGATTCCAA TGGTTCTTGA AGGTAAGGAT
GTTATTGGGC AAGCACAAAC AGGGACTGGT AAGACGGCTG CTTTTGGATT GCCAATTATT
GAAAACGTTG ATACTGAAAA TCTCAATATT CAAGCAATTA TCATTTCACC AACACGTGAA
TTAGCAATCC AGACTCAAGA AGAACTTTAT CGTCTTGGTA AAGATAAACA TGTTCGCGTG
CAAGTAGTAT ATGGTGGGGC AGATATTCGG CGCCAAATTA AGAGCTTGAA ACAACACCCA
CAAATTCTCG TGGGGACCCC TGGACGGTTA CGTGACCATA TTAACCGTCA TACAGTTAAA
CTTGACCACA TTAAGACCCT TGTCCTCGAT GAAGCAGATG AAATGCTAAA CATGGGATTC
TTAGAGGATA TTGAATCAAT CATCAAGGAA ACACCAGATG ATCGGCAAAC ATTGCTCTTC
TCAGCAACCA TGCCACCAGA AATCAAGCGG ATTGGAGTTC AATTTATGTC TGATCCGGAA
ACTGTGCGGA TCAAGGCCAA AGAATTGACT ACTGACTTAG TTGATCAGTA CTATATTCGC
GCGCGTGACT ATGAAAAGTT TGACATCATG ACCCGTTTAA TTGACGTTCA AGATCCTGAC
TTAACAATTG TCTTTGGTCG GACAAAGCGG CGGGTAGATG AATTGTCGAA GGGCTTGATT
GCGCGTGGCT ACAATGCAGC TGGTATTCAT GGTGACCTTA CTCAAGATAA GCGTTCTAAG
ATCATGTGGA AGTTTAAGAA CAATGAACTT GATATCTTAG TTGCAACAGA TGTGGCTGCT
CGGGGCTTAG ACATTTCCGG GGTTACGCAT GTTTATAATT ATGATATTCC ATCTGACCCA
GACAGCTATG TTCACCGGAT TGGCCGAACA GGACGGGCCG GACATCACGG GGTATCCTTA
ACCTTTGTTA CCCCAAATGA GATGGATTAC CTTCATGAGA TTGAAAAATT AACCCGGGTA
CGGATGCTGC CACTTAAGCC ACCAACAGCT GAAGAAGCAT TTAAGGGTCA AGTTGCCTCA
GCCTTTAATG ATATCGATGA ATTAATCGCG CAGGATTCAA CTGATCGTTA TGAAGAAGCC
GCTGAAAAGC TACTAGAAAC TCATAATGCA ACTGATCTGG TAGCAGCATT GTTAAATAAC
ATGACGAAGG AAGCGGCCAG TGAAGTTCCA GTTAAGATTA CTCCTGAACG TCCTCTCCCA
CGGCGTAACA AGCGGAATAA CCGTAATGGC AACCGAAATA ATTCGCATGG TGGCAACCAC
TACCGGCGTA AGAATTTCCG CCGTCACCAA CATGGTGGTG GTCACCGAAA TGATAACCAT
GGAAAGAGCC ATTCCAGTCG CCATGCATTT AATATCCGTC ATCGAAAAGA AGATTAA
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| Protein sequence | MKFSELGLSD SLLKAIKRSG YEEATPIQEQ TIPMVLEGKD VIGQAQTGTG KTAAFGLPII
ENVDTENLNI QAIIISPTRE LAIQTQEELY RLGKDKHVRV QVVYGGADIR RQIKSLKQHP
QILVGTPGRL RDHINRHTVK LDHIKTLVLD EADEMLNMGF LEDIESIIKE TPDDRQTLLF
SATMPPEIKR IGVQFMSDPE TVRIKAKELT TDLVDQYYIR ARDYEKFDIM TRLIDVQDPD
LTIVFGRTKR RVDELSKGLI ARGYNAAGIH GDLTQDKRSK IMWKFKNNEL DILVATDVAA
RGLDISGVTH VYNYDIPSDP DSYVHRIGRT GRAGHHGVSL TFVTPNEMDY LHEIEKLTRV
RMLPLKPPTA EEAFKGQVAS AFNDIDELIA QDSTDRYEEA AEKLLETHNA TDLVAALLNN
MTKEAASEVP VKITPERPLP RRNKRNNRNG NRNNSHGGNH YRRKNFRRHQ HGGGHRNDNH
GKSHSSRHAF NIRHRKED
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