Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0112 |
Symbol | |
ID | 5189755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 137982 |
End bp | 139175 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640589904 |
Product | phosphopentomutase |
Protein accession | YP_001270721 |
Protein GI | 148543351 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1015] Phosphopentomutase |
TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000070678 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATATA AACGTGTTTT TGTTATTGTA ATGGACTCAG TTGGTACAGG TGCCGCTCAT GACGCCGCAA AGTTTGATGA TGTTGGATCA GATACGCTTG GCCACGTTGG TGAGTATTAC AAGGGTGCCT TGAAGCTACC AAACCTTGGT AAATTAGGGA TTAGTAATTT GCGCGATACT CCGATTGAAG GGGTTCCAGT TGCTGATCCA GCTATTGGTG ATTACGGTAA GATGGAAGAA ATTTCTGCCG GAAAAGATAG TATGGATGGT CACTGGGAAA TGATGGGTTT ACCAGTAATG AAGCCATTGT CAACGTTCCC TAATGGTTTT CCACAAGAAA TTGTTGATAA GCTTGAAAAA TTCTCAGGAC GAAAGGTTAT TGTTAACAAG CCATACTCAG GAACAGAAGT AATTCATGAC TATGGTGAAC GTCAAATGGA GACCGGAGAA TTAATTCTCT ACACGTCTGG TGATTCAGTA ATGCAGATTG CTGCTCATGA AGATGTTATT CCTGTTGAGG AACTCTACAA GATTTGTGAA TATGCCCGGA CACTTGTTAA TGGTCCAGAA TATACTGTTG GTCGGATTAT TGCCCGTCCA TATGTTGGTC CCGATAAAGA TCACTTTACC CGGACTGCTA ATCGACATGA CTTTAGTTTG AAGCCAATTG GTGAGACTGA TATGGATCGT CTTCGTGCAG CAGGGTACGA TGTAATTGGT GTTGGTAAGA TTAATGATAT CTTCTCTGGT GAAGGGATCG ATAAAGGATA CCATAACGAA AGCAACATGG ACGGAATGGA TCATGTTGAT GAAGTAATGA AGCAAGACTT TACTGGTTTC TGTTTCACAA ACTTGGTCGA TTTTGACGCA ATGTATGGTC ACCGTCGTAA TCCAAAGGGC TTTGGTCAAG CATTAATGGA CTTTGATAAG CGTTTAGGCA ATGTTCTTGA TGAAATGAAG CCAGATGATC TTTTGATGAT AACTGCTGAT CACGGTAATG ACCCTGGCTT TAAGGGAACT GATCATACAC GTGAAAATGT TCCATTGTTG GTTTACTCTC CTTCAATGAA CAAGCCAAAT CAATCCCTTG GGGTGCGGAA GACATTCTCA GACCTTGGTG CAACTATCTT AGAGAACTTT AACGTTGAAC CAGTAAAAGG TACCAGCTTC TACAAGGAAA TTAGTAACGA TTAA
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Protein sequence | MSYKRVFVIV MDSVGTGAAH DAAKFDDVGS DTLGHVGEYY KGALKLPNLG KLGISNLRDT PIEGVPVADP AIGDYGKMEE ISAGKDSMDG HWEMMGLPVM KPLSTFPNGF PQEIVDKLEK FSGRKVIVNK PYSGTEVIHD YGERQMETGE LILYTSGDSV MQIAAHEDVI PVEELYKICE YARTLVNGPE YTVGRIIARP YVGPDKDHFT RTANRHDFSL KPIGETDMDR LRAAGYDVIG VGKINDIFSG EGIDKGYHNE SNMDGMDHVD EVMKQDFTGF CFTNLVDFDA MYGHRRNPKG FGQALMDFDK RLGNVLDEMK PDDLLMITAD HGNDPGFKGT DHTRENVPLL VYSPSMNKPN QSLGVRKTFS DLGATILENF NVEPVKGTSF YKEISND
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