Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0105 |
Symbol | |
ID | 5189570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 132225 |
End bp | 133193 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640589897 |
Product | effector of nucleoid occlusion Noc |
Protein accession | YP_001270714 |
Protein GI | 148543344 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000144978 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTTTT CATTATTTGG TATTGGAAAA AATAATTCTG ATAATACAAA AAATAAGGTC GTAGAAGTAA AAATTGATCA AATCATTCCT AACCGCTATC AGCCGCGAAA GGTTTTTGAT CAAGACGGTA TTCGTGAATT AGCACAGACA ATTGATGAAC ACGGGTTGTT ACAACCAATT GTTTTGCGTG AATACGAACC AACAAAATAT GAAATTATTG CTGGGGAACG TCGATACCGG GCGATGAAGC TTTTGAAGTG GGAAAAAGCA CCAGCAATAA TCGAAAAGAT GAGTGATCAA GAAACTGCAT CGCTTGCCCT CATTGAAAAT CTGCAACGGT CGCAATTGAG TTCAGTAGAA GAAGCGCAGG CTTACCGGCA ATTAATGGAC TTAAACCATC TTACGCAGTC ACAATTAGCA AAGGGAATGG GAAAGAGTCA GTCCTTTGTT GCCAATAAAT TACGGTTACT TCGCCTGATT ACTCCTGTCC AAACGGCTAT TTTAGATCAC CGGATTACGG AACGTCATGG TCGAGCATTG TTAGATTTAG ATGAAAAGCA ACAACGTGAT ATGTTAATGC GGATTGTTAA TGAACGGTTA ACAGTTCGGC AGACGGAAGA TGAAGTTGCT CGTTTGCTAG GACGTCCTTT ACCTTCAGAA ATTGCAGAAT TAAAAGCAGC TGCTAAGCGC AAAGAACTGG CATCTATTGA AGATCATACT GAAGAAACAG CAGACGTTGA AGAAGTATCA GTAGAGAAAC CGGCCGAAAA GAAGCGGGCT CCTAAACGAA AGACAGCTAA GAAGTCCCAA AGTAAAAAAA CTCAGCAGGT TAATGATGCG CGTTTAGCTT TAAATACGAT AAAAAAATCA ATTAAGCTGG CGACAAATGA AGGCTTTGAA ATAAAAATGC ATGAGGAAGA AAACGGTGAT ACTTATCAAT TAACAATTGA GATTCCGAAG AAACAGTAG
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Protein sequence | MAFSLFGIGK NNSDNTKNKV VEVKIDQIIP NRYQPRKVFD QDGIRELAQT IDEHGLLQPI VLREYEPTKY EIIAGERRYR AMKLLKWEKA PAIIEKMSDQ ETASLALIEN LQRSQLSSVE EAQAYRQLMD LNHLTQSQLA KGMGKSQSFV ANKLRLLRLI TPVQTAILDH RITERHGRAL LDLDEKQQRD MLMRIVNERL TVRQTEDEVA RLLGRPLPSE IAELKAAAKR KELASIEDHT EETADVEEVS VEKPAEKKRA PKRKTAKKSQ SKKTQQVNDA RLALNTIKKS IKLATNEGFE IKMHEEENGD TYQLTIEIPK KQ
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