| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0098 |
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| Symbol | |
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| ID | 5189110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 123305 |
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| End bp | 124768 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640589890 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001270707 |
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| Protein GI | 148543337 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000321849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAGCA GCAAGATAAA AAATATGATC ATCACCATTG TTGCAGTTCT TGGAATTGTA
GTGGGGTGGC AAATGGTCGA ACCTCAGCAG GTATCTGCTG CCGAACCGAC TTATACGTTT
GCAACTAATA ACACCTTTGA ACCCTTTGAA ATTCAAGATA GTAAAGGTGG GTACTCAGGA
AAGAATCCTG GGATTGAAAT TGAAATACTT AAGAAAATTG CTAAGCATGA GCATTTTAAG
TATGAACTGA AGCCAATGAG TTTTAATGGT GACTTACAAG CTCTTGAAGC AGGACAAGTT
GATGCAGTAA TTGCTGGAAT GAGCGTTACT GATGAACGAA AAGAAAAGTA TGATTTTTCA
ACACCTTACT ATACTAGCGG GGTTGTTATG GCTGTTGCAA AAGATAGCAA TATTAAGTCG
ATGAGCCAAT TAAAAGGCAA AACAGTTTCG GCTAAGTCAG GAACGAGTGC GGCATTATTT
TTGAAGAACA ACCAAAAGAA ATATGGTTAC AAAATTCGCT ACTTTGATTC CTCAAATACG
ATGTGGAATG ATGTGAAAAC TGGGAACACA GTAGCTACTT TTGATGATGG TCCTGTTCTT
GAATACGGAA TTAAAGAAGG TGTCCCACTT AAGATTGTGA CAAAGAAGCC AATTGATGCA
CAACCAGTTG CTGTTGGATA CCAAAAGGGC AAGAACTTAG AATTACAGAA AAAGATGAAT
GATGGGATTA AGTGGCTAAA AGATACTGGC CAAATGGATC AAATCATTGA TAAGTATACT
AAGAGTGACA AAACGACGAA GGGCAGCGCG ACTGATCGGA CAATTTTGGG ATTAATCCGC
GCCAATTATC CAGCCTTGCT TCGTGGATTA TGGATGACAA TTGAATTAAC CGTTGTCGGC
ATTATTTTTG CGATGATTTT TGGAGTAATT CTAGGTGTAT TAGGTATTGC ACAAAACAAA
TTTGCCAATG CTGTTTCTAG TACCCTGATT TATATCTTCC GTGGTATTCC AATGATTGTT
TTAGCCTTCT TTATTTACAT GGGGATTCCA AATGTTATTG GCCATAAAGT TCCGTTATTC
TTAGCAGGAA TCTTAACGCT GACTTTTAAC GAAGGGGCCT ATATTGGAGC CATTGTTAAA
GGTGGATTTG AATCCGTTAA TATTGGACAG TGGGAAGCAG CACGGAGCTT AGGGTTGCCA
TATAGCAAAG CCTTGATTAA AGTTATTGCT CCTCAAGGAT TTAAGTTAAT GATTCCTTCG
TTAGTTAACC AGTTTATTAT TACCTTGAAA GACACCTCAA TTCTTTCCGC AATTGGTGTA
ATGGAACTTA CGCAAACGGG GACTGTTATC ATTTCCCAGA ACATGGAAGG ATTTAAGATG
TGGTTAATCA TTGGAACGAT GTATATCATT ATCATTACCC TGTTGACTTG GTTATCAAAC
TACGTACAAA AGAGGATGGG TTAA
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| Protein sequence | MHSSKIKNMI ITIVAVLGIV VGWQMVEPQQ VSAAEPTYTF ATNNTFEPFE IQDSKGGYSG
KNPGIEIEIL KKIAKHEHFK YELKPMSFNG DLQALEAGQV DAVIAGMSVT DERKEKYDFS
TPYYTSGVVM AVAKDSNIKS MSQLKGKTVS AKSGTSAALF LKNNQKKYGY KIRYFDSSNT
MWNDVKTGNT VATFDDGPVL EYGIKEGVPL KIVTKKPIDA QPVAVGYQKG KNLELQKKMN
DGIKWLKDTG QMDQIIDKYT KSDKTTKGSA TDRTILGLIR ANYPALLRGL WMTIELTVVG
IIFAMIFGVI LGVLGIAQNK FANAVSSTLI YIFRGIPMIV LAFFIYMGIP NVIGHKVPLF
LAGILTLTFN EGAYIGAIVK GGFESVNIGQ WEAARSLGLP YSKALIKVIA PQGFKLMIPS
LVNQFIITLK DTSILSAIGV MELTQTGTVI ISQNMEGFKM WLIIGTMYII IITLLTWLSN
YVQKRMG
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