| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0089 |
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| Symbol | |
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| ID | 5188807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 109757 |
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| End bp | 111163 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640589884 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001270701 |
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| Protein GI | 148543331 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000133484 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAA CTAAACAACA TGAACAAGAT GTTGATGTAT GGGTTGGGAA ACGATTCCCC
CTCACGATTC GTCGCCTTGG CGTTAACGGG CACGGAATCG GCTACTATAA GCACAAGGTA
TGTTTCGTCC CTGGTGCCCT GCCAAATGAA GTCGTGGTCG CGGAAGTTAC ACGCGTTCTC
CCGCGCTACC TTGAAGCTAA AATTCACCGG ATCCGGAAAA AGAGTCGGGA TCGGGTAACG
CCACGAGATG AGTACGCTGA TATCGCTGGT GGTTTTGAAC TTGAAAACCT CGCTTACCAA
CAACAATTAA AGTTTAAACG GCAAGTAATC ATCGATAGTC TCGAAAAGTT TCAACCATAC
GGCTACCGTA ATTACGATGT TCGCCCAACT ATTGCAGCCC CTGAAGAATA CGGTTACCGT
AACAAGGCCC AATTCCAGGT GCGGATGGTC AACGGCAAAG TGGCAGCCGG TCTTTACCAA
CCAAACAGTC ATACCCTTGT TGATATGGAG ACTTGTGCTG TTCAAATGCC CCGTACAATG
GAGACAGTTC GCGCCGTTAC AAAGATGATC GAAGACTTGC AAATCCCGGT TTATGATGAA
AAGCACAATA GCGGTATCGT CAAGACCTTA GCCGTTCGGG AATCATGGTC AACTGGGGAA
GTCCAATTAA CCTTCATTAC TAATTCTGCT AAACTTCCTC ACAAACGCGA ATTGCTTGAA
CGCATTGAAA AAGAACTACC AGCAGTTGTT TCAGTTATGC AAAACGTTAA CCCAGGTGAT
ACACCCTTAG TTTGGGGTGA TAAAATGATC CACCTCGCTG GAAAAGATTC AATCCTTGAA
AGCTTGATGG GGCTTGATTT TAAACTCTCA GCACGTTCAT TCTTACAACT AAATCCTGAA
CAAACAGAGG TATTGTACGA AGAAGCTTCT AAGGCCCTTG AACTAGACCA AGATGATACC
TTAATTGATG CATATGCCGG GATCGGGACA ATCGGTCTTT CACTTGCATC GCGGGTGAAA
GCTGTTCGCG GAATGGAAAT CATCCCCGAA GCAGTGGCTG ATGCGAACGA AAATGCCAAG
CTAAATAATA TCACTAACGC TAAATATGAA GTCGGCAAAG CAGAAGAAGT TCTTCCCCGC
TGGCAAAAAG AAGGACTCAA CTTTGATGCC CTTGTTGTTG ATCCTCCGCG AACCGGGTTA
GATGATCAAT TAATCAAGCA AATCTTAAAA GTTAAGCCGC GAAAGTTTGC CTACGTCTCA
TGTGGGATGG CTTCTCTCGC CCGCAACTTA CGGCGGTTAA CTAGTGTCTA TCACGTTGAC
TACATTCAAC CAATTGACAT GATGCCCCAA ACAGCACGCT GTGAGGCAGT CGTGAAATTA
TCATTACGAA ACGGAAATAA AGAATAG
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| Protein sequence | MTQTKQHEQD VDVWVGKRFP LTIRRLGVNG HGIGYYKHKV CFVPGALPNE VVVAEVTRVL
PRYLEAKIHR IRKKSRDRVT PRDEYADIAG GFELENLAYQ QQLKFKRQVI IDSLEKFQPY
GYRNYDVRPT IAAPEEYGYR NKAQFQVRMV NGKVAAGLYQ PNSHTLVDME TCAVQMPRTM
ETVRAVTKMI EDLQIPVYDE KHNSGIVKTL AVRESWSTGE VQLTFITNSA KLPHKRELLE
RIEKELPAVV SVMQNVNPGD TPLVWGDKMI HLAGKDSILE SLMGLDFKLS ARSFLQLNPE
QTEVLYEEAS KALELDQDDT LIDAYAGIGT IGLSLASRVK AVRGMEIIPE AVADANENAK
LNNITNAKYE VGKAEEVLPR WQKEGLNFDA LVVDPPRTGL DDQLIKQILK VKPRKFAYVS
CGMASLARNL RRLTSVYHVD YIQPIDMMPQ TARCEAVVKL SLRNGNKE
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