Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0084 |
Symbol | |
ID | 5188838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 100979 |
End bp | 102364 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640589879 |
Product | major facilitator transporter |
Protein accession | YP_001270696 |
Protein GI | 148543326 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000380135 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAT CACTTTCGAA TTCGAAACAA AAAGTTGAAA CGAAGCAGGT TGATCTGGAT ACAGGAATGC CAGATTTACC AAAGAAAGAG CTATTTGCGA TTACATTTGC TTTTTTGGGA ATAAACATGG CTTTCTCACT GCAGAGTTCT CAGATGAGTC GGATTTGTCA AACGATTGGG GCAAATCCTA ACAACCTTGG CTTCTTCTTC ATTTTTCCAC CATTGATGGG AATGATTGTG CAACCGATTA TGGGGAAGAT GTCAGATCGG ATGTGGAATC GCTTTGGTCG CCGGTTACCA TATCTACTGT TTGGGACACC AATTGCGGCA TTAGTTTTGA TTATGTTACC ATTCTCTGGT TCCCTTGGTT TCGGCTATGG TTCAATGGCT GCGATGATTT ATGCTGCGAC GGCGGTATGT TTGATGGACT TATTTAGTAA TATTTGCATG CAGCCATCAC GGATGATTGT TGGTGACATG GTTAATAACA AGCAGAAGAA CTTTGCTTGG TCATGGCAAC AGGTCTTTTC TAATGGTGGG GGAATTTTAG CAACGATCTT GCCATTTATC TTTACGATGT TCGGGATGTC CAATACTGCT AAACGAGGAG TTGTGCCAAA CACCGTTATC TGGTCATACC TTTGTGCAGC GGCGGTTCTC CTGTTTACTG GATTATGGAC GGTCTTTAAT GTTAAGGAAT ATGATCCGGA AACATATGCA AAATACCACC ACATTGATCC CGAAGAACAA AATAAATCAG TCAGCCTTTG GAAATTGATT AAGACGGCAC CGCGCGCTTT CTGGGAAATC AACTTGGTTC AATTGTTTAG CTGGTTTGCG ATCATGTACG TTTGGACATA CACGACTGGA ACCTGTGCTC GTAATATTTG GCATACGTCT GATGTTACTT CTGCTGGTTA TCAAGCTGCC GGTAACTGGT ATGGGATTTT AACTGCTGTT TATAGTATTG CTGGTATTGT TTGGGGATTA ATTTATGCCC ATGCCAAGGC TGGCTCACGG AAGAAGTGGT ACACATTTGG AATGATCGTC GGTGGTTTAG GGTTAGTCTG GATGACCTTT GTAACAACTA AGACTACTTC AATCATTGCA ATGATCATGT TTGGGATTGG TAACTTCAGT ATCAACACGA TTCCATTTAC CCTCCTTACT TCATCTTTGA ACGGGAAAAA TGAAGGTGCC TACCTCGGAC TCTTCAACGT TGGAATCTGT GTACCGCAAA TTGTTGCATC GTTATGTAGC TTCTTCCTCT TCCCACTTGT TGGTCACAAT CAACCAATGA TGCTTTTGCT TGGTGGCATC TCCCTTCTTA TTGGGGCTTT AGCTGTCCAA GCAATTCATG AAGGGGTAAC GGTTAAAGAA GCATAG
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Protein sequence | MDKSLSNSKQ KVETKQVDLD TGMPDLPKKE LFAITFAFLG INMAFSLQSS QMSRICQTIG ANPNNLGFFF IFPPLMGMIV QPIMGKMSDR MWNRFGRRLP YLLFGTPIAA LVLIMLPFSG SLGFGYGSMA AMIYAATAVC LMDLFSNICM QPSRMIVGDM VNNKQKNFAW SWQQVFSNGG GILATILPFI FTMFGMSNTA KRGVVPNTVI WSYLCAAAVL LFTGLWTVFN VKEYDPETYA KYHHIDPEEQ NKSVSLWKLI KTAPRAFWEI NLVQLFSWFA IMYVWTYTTG TCARNIWHTS DVTSAGYQAA GNWYGILTAV YSIAGIVWGL IYAHAKAGSR KKWYTFGMIV GGLGLVWMTF VTTKTTSIIA MIMFGIGNFS INTIPFTLLT SSLNGKNEGA YLGLFNVGIC VPQIVASLCS FFLFPLVGHN QPMMLLLGGI SLLIGALAVQ AIHEGVTVKE A
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