| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0050 |
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| Symbol | |
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| ID | 5190144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 59857 |
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| End bp | 64035 |
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| Gene Length | 4179 bp |
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| Protein Length | 1392 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640589846 |
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| Product | recombination helicase AddA |
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| Protein accession | YP_001270663 |
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| Protein GI | 148543293 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02785] recombination helicase AddA, Firmicutes type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.110759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGAT TTAAACCAAC GCCTGCTCAA TCCAAGGCGA TTAATGACCG TGGCGAAAAT
ATCCTAGTTT CAGCTTCCGC GGGATCAGGA AAAACGGCTG TGCTAGTAAA TCGGACAATT
GAATTGATTA AAGAAGGGCA AAGCATTGAT CGAATGCTGC TCGTAACATT TACGGATGCA
GCAGCAAAGA ATATGCGGGA TAAAATCAGG GCAGCCTTGC AGAAAATAGT ACAAGATTCC
GCTAATCCCA AAGATTTACG TGACCGGATG AGTAATCAAA TTAACCGGCT TGCGGCTGCA
GATATCAGTA CAATTCATGC TTTTTGTTTA AAGTTAATAA AGCGCTACTA CTACTTAATT
GATCTTGACC CACAATTTCG GCTTTTAACT GATGAAACGG AGCGATTATT ACTTCAAGAA
GATGTCTGGC ATGAAGTTAG CGAAGAATTA TATAGAAATG CTGAAGAAAA AGTTTCGGGA
AAAGCTTCCT TTAGCGAACT AGTCCTCAAC TTTTCTAGTG ATCGTGATGA CCAAGGACTC
GACGACTTGA TTTTACGATT ATATGAAATT GCTAATGCCC AGCCTGACCC CGAAAAGTGG
CTCCAAAAAT TACCAGATAA TTATGATTTA GGGTCGGGCT CACTATTAGA ATCTAATTTT
TATCAACAAC AGCTAAAGCC CCTAGTCATC GAAAAGCTCA ATCAGTTCAT TCAAGATTAT
CGTGAATTAG TAACAAGAGC TAGTGATAAC GGACTAGACC AAGCAGCCGA GGTTATTAAG
AGTGATGAAG AGTTGATGCA CCAACTTCTT TCTTCACTAG GGGGGATTAC CGTCAGTGAT
GTTTGTCAAA TGATGGCGCA GCAAAAGTTT GGTAGTTTTC GGGGACGACC AGCGGCAGAT
GATCCACGGA TTGATGTATT TAAAGACATT CAAAAGCAGC GTAATCAGCT AAAGAAGCAG
TGGGAACAAA TGGTTAGTAC TTACTTGGGA AAGCAGGAAG CACAGGAACC AATTGCAAAA
GAAGAGCTGC TAACTGAGCT AACGACTTTC AGTGATCAAT TTACAGACTT GTTAAGCAAA
GCAACGGAAA GTCAATTAGA CGCTAAAACT GTTGATTCAT TGCAAAAAGA CCAGCAGATG
ATGCAGGAGC TTTTAGACTT ATTGCAGCCA CCTACTTGGA ATACTATTCG GGACCTATTT
GCTAATGCTA AATTTGCACG AATGGGTGGT AAACCGAAAG ACGATGAGCT AGCTGAGGAA
GTATATAAAT CACTAGGAAG TGCTCGCACA GGGATAAAAA AGCAATTTGA TCAGTTAGTC
GATCGCTTCT TTAATTACCG TGAAGACCAA TTTCGATTAA TTTCAACGCA TGCCCAGGAA
CTTTTACGCG AATTGAGCGC GGTAACGATT AATTTCCGTC GGCGATACCA ACAAACTAAG
CTGAATCGGC ATGTCCTTGA ATTTAGTGAC TTGGAGCACT ACGCGTACGC CATTTTAACG
CCACCAGACG ACCAGCCAAA CTGGCAAACC CTTGTCAAAG ATCTGCAAAA TCATTATCAG
GAAATTATGA TTGATGAATA TCAGGATACG AACCGTCTTC AGGAAAGTAT TTTGATGAAA
TTGACATCTC CTGAACGCAA GAACCTATTT ATGGTGGGGG ATGTTAAGCA ATCGATTTAC
CGCTTCCGTG AAGCTGATCC AACATTATTT CTCGGGAAAT ATCAAAACTA TCGTCAAGGC
AGCGACGGGG AAGCGATTGT TCTGGGAGAA AATTTCCGGT CGATGACTAA TGTAACGAGC
TTTACCAATA TTCTTTTCGA ACAACTCATG GATAGGGAAG TTGGTGAAAT TGATTACGAT
GAAGATGCCC ATTTAAAATA TGCGGCAACT TATTACGAAG AAAATCAAGA TAATAAGGTT
CACCCAACAG AAGTGTTACT GTATGACGCT AATGCCCTTG ATCCAGAAAA AGAAGATGTT
GAACATGAGG ATGATAAATT AGCTGGAGAA TTTCGGATGA TCGGGATGCG AATTAAGCAG
ATGGTCGAAA ATCAAGAGTT AATTTTTCAT CCAGAAGATG GGCAGATGCA TCCAATTCAG
TACGGTGATA TTGTTTTGCT TGAGCGGACA AAGGCAATTA ATAATTCATT GATGGAAGAG
TTTAATAAAC TTAATATTCC ATTGACAGTT CACGATGTTG AAAGCTATTT TCAAGCTACT
GAAGTGCGAG TAATGATGTC CTTGTTGAAG ATAATTGATA ATCCACAACA GGATATTCCA
TTAGTTGCGG TTTTACGGTC ACCGATTGTC GGGTTAACTA ATCAAGAATT AGCTTTTATC
CGTCTTCAGA ATCGATCTGT CGATTACTAC GCCGCCTTGC AAACATTCAT GAGTAATTAC
CAGCGAAAGG CTCTTCGCCA TCAATCGCTT CTTACTTCTG AACAGGTAAA TGCCCTTTAT
GAAAAAGCAG ATCACTTCTT AGGTTTGCTT CGTGTCTTTC GACAAACAGC TCAGCAACAA
ACCCTTGTTG ACTTGATTTG GCAGATCTAT GACCAAACAG GTTACCTTGA TTATGTCGGA
GCAATGCCAG GAGGCCACCA ACGACAAGCA AACCTTCATG CCCTTTACCA ACGTGCGCAC
TCCTATGAAC AAAGCAGTTT TAAGGGCCTT TACCAATTTA TTCGCTTTAT TGAGAAAATG
CAGGAACATG ATAAAGATTT AGGAGTAGCA CCGACACAGT TAACTGCAAA TACGGTTAAT
GTTATGACAA TTCACGGAAG CAAAGGTCTT CAATTCCCCG TGGTCTTTCT AATTGATGCC
ACGCATGGTT TTAACAAAGG AGCAGCTCGT GAAAATGCAG TTGTCGATGC TGTTGCCGGG
GTAGGAATTC GTTACATGGA TGATCAACGG GTCATTTATG ATACGCCACA ACGACAAGCA
GTGATTGAAG AAATCCAGCG CGGCGAACGG GCAGAAGATC TTCGAGTTCT CTATGTTGCA
CTGACCCGTG CGGAACAACG ATTAGTTATT ACGGGATCCT TTAATGAAGA AATGCGGACA
CAAAGTCTTG CTGGGTCATG GCAGCGGTGG CAAAAAGCTT ATCAGAGTAA GAATTTACTA
ATTGGCCCGC AGCCACGGAT CACTGCAAAT TCATTTATGG ACTGGGTCGG CCTTGCCCTG
GCTCGTTATC CAGAATTCAA CGCGCAACAA TTGAGTCGTG GAAATGTCAC GTTAGAAGAA
AGCACACTTG CTGATACTAA AGTTACTGGT TTGGCGGCTG ATCCTCACTT TACTGCAAAA
ACATATACCG CACTTGATGT TAGCGATGGA TTGGCAAAAA TTGGGCAAAA TGCTAGTGCT
AATGTAACGG AAAAGAACAA TACAGTCGCA ACTGATGCTT CTGAACAAAA GATTGAGCAA
ATTTTGCGCT ATCGTTACCC CCATCTTGTC GCTACTAAAA CAACTGCTTA CCAATCTGTT
ACAGATGTAA AACGAGTCTT TGAAGATCCT GATACACGTG ATATGGCGCG GTGGGATTAT
GATCAACAAC AAAAGGTAAA GACACAAGGG ATTTATTTAA ATAATAACTT TGATGTCCCG
GCTTTCATCC AACAGACTAC TCATGAACCA GTAGCAACAG AAATTGGAAC AGCAACTCAC
CTTGTTTTCC AAAAACTTCC GCTTGATGAA GGCCTGATTA ACGTTGAATT TGTTGATCAA
GAAATTCAAA AATTGGTAGG AGAAAAATTG ATCAATCCAG TTGTGGCAGC ACGGATCAAT
CGTGAGGGAA TAGTGGCCTT TTATCAGACC GCTGTTGGTC AGAAGATCTT AAAGCATCCC
GCAGATTATC ATCGCGAAGT ACCCTTCTCA ATGATTATGA ATGGTCATGA ATTATTTAAA
GGGGTAAATG TTAGCGATGA TGAGCGTATT TTAATTCACG GAATCATTGA TGGCTACTTA
AGAACTGACG AGGGAATTAT TCTAGTTGAC TATAAGAACG ATCACCTTAA TAAAGATTAC
CGCGACTTTG ATCTGGCACG GATAAAGGAC CGCTACCGGG GACAATTAGA GCTCTACAAA
GAAGCTTTGA ACCTAATGGA AGGGATTCCA GTTGTCCAAA TGGGGCTTTA CCTGTTAGAA
TTAGGAGAGT TCGTGTTATT TACAAAAGAG GGTGATTAG
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| Protein sequence | MAGFKPTPAQ SKAINDRGEN ILVSASAGSG KTAVLVNRTI ELIKEGQSID RMLLVTFTDA
AAKNMRDKIR AALQKIVQDS ANPKDLRDRM SNQINRLAAA DISTIHAFCL KLIKRYYYLI
DLDPQFRLLT DETERLLLQE DVWHEVSEEL YRNAEEKVSG KASFSELVLN FSSDRDDQGL
DDLILRLYEI ANAQPDPEKW LQKLPDNYDL GSGSLLESNF YQQQLKPLVI EKLNQFIQDY
RELVTRASDN GLDQAAEVIK SDEELMHQLL SSLGGITVSD VCQMMAQQKF GSFRGRPAAD
DPRIDVFKDI QKQRNQLKKQ WEQMVSTYLG KQEAQEPIAK EELLTELTTF SDQFTDLLSK
ATESQLDAKT VDSLQKDQQM MQELLDLLQP PTWNTIRDLF ANAKFARMGG KPKDDELAEE
VYKSLGSART GIKKQFDQLV DRFFNYREDQ FRLISTHAQE LLRELSAVTI NFRRRYQQTK
LNRHVLEFSD LEHYAYAILT PPDDQPNWQT LVKDLQNHYQ EIMIDEYQDT NRLQESILMK
LTSPERKNLF MVGDVKQSIY RFREADPTLF LGKYQNYRQG SDGEAIVLGE NFRSMTNVTS
FTNILFEQLM DREVGEIDYD EDAHLKYAAT YYEENQDNKV HPTEVLLYDA NALDPEKEDV
EHEDDKLAGE FRMIGMRIKQ MVENQELIFH PEDGQMHPIQ YGDIVLLERT KAINNSLMEE
FNKLNIPLTV HDVESYFQAT EVRVMMSLLK IIDNPQQDIP LVAVLRSPIV GLTNQELAFI
RLQNRSVDYY AALQTFMSNY QRKALRHQSL LTSEQVNALY EKADHFLGLL RVFRQTAQQQ
TLVDLIWQIY DQTGYLDYVG AMPGGHQRQA NLHALYQRAH SYEQSSFKGL YQFIRFIEKM
QEHDKDLGVA PTQLTANTVN VMTIHGSKGL QFPVVFLIDA THGFNKGAAR ENAVVDAVAG
VGIRYMDDQR VIYDTPQRQA VIEEIQRGER AEDLRVLYVA LTRAEQRLVI TGSFNEEMRT
QSLAGSWQRW QKAYQSKNLL IGPQPRITAN SFMDWVGLAL ARYPEFNAQQ LSRGNVTLEE
STLADTKVTG LAADPHFTAK TYTALDVSDG LAKIGQNASA NVTEKNNTVA TDASEQKIEQ
ILRYRYPHLV ATKTTAYQSV TDVKRVFEDP DTRDMARWDY DQQQKVKTQG IYLNNNFDVP
AFIQQTTHEP VATEIGTATH LVFQKLPLDE GLINVEFVDQ EIQKLVGEKL INPVVAARIN
REGIVAFYQT AVGQKILKHP ADYHREVPFS MIMNGHELFK GVNVSDDERI LIHGIIDGYL
RTDEGIILVD YKNDHLNKDY RDFDLARIKD RYRGQLELYK EALNLMEGIP VVQMGLYLLE
LGEFVLFTKE GD
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