Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0049 |
Symbol | |
ID | 5189386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 56075 |
End bp | 59857 |
Gene Length | 3783 bp |
Protein Length | 1260 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640589845 |
Product | DNA helicase/exodeoxyribonuclease V, subunit B |
Protein accession | YP_001270662 |
Protein GI | 148543292 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3857] ATP-dependent nuclease, subunit B |
TIGRFAM ID | [TIGR02773] ATP-dependent nuclease subunit B |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAACAC TGGGATTTGT TTTAGGAACA GCAGCGATGG ATCATCAGCA AGTATTGATT GATCAATTAG TTGACCAGGT AAAGAATACA CCTGCTGATG ACACCTTTTA TTATTTGGTG CCCAACCATA TTAAGTTTGA AACTGAAATT AATGTTCTTG CTGGTCTTCG TGATCGCCAA GGACTTAGTG GGAGTGATCG GTTCGCCTCT TCACGCGTAC AGGTACTTTC ATTTAGCCGG CTTGCTTGGT ACCTTTTACG AGATACTCCA GCTTTTCAAA AACAACACCT TTCTAAAATT GGGATGGCGA TGCTAACTTC TCAAGTTGTT CAAGAACAGG CAAGTGATCT CCGTTTATAT GCGAGCGAAG TAAAACAACC TGGCTTTATT CAAAAGATGA CAGCTCAGCT TGAAGAATTA AAAAATGCCA ACATAACCGC CGATGACTTA ACTGATATTA TTTACCGGGT GAAGTCCGCG AATGATCCAG CAGCTAATCA GGCGTGGCTC GCTAAAATGT ATGATGTTGA AACTATATAT CATGCTTATG AAGCCCGGTT GCGTGACCGG TACATTGGTA ATAGTGAGTT ATACCGGCAA TTAGTGTCTT ACCTTCAAAA ATCACCAGAA GTCGCTAAGA TGCACTTCTT TATTGACCGT TTTGCTCAGT TTACTGCAAA TGAACAACAA GTAGTTGATG CATTAATTAC TAATGCCGCA TCGACAACTA TTTCTTTAAC CCTTGATCGT GGATACCCAG ACCAGAATCA TCCAAATCCC CAGGAACTTC CTCCTAAAAA TAATTTATTC TATTCCTCCG CGATGCAATT TCACCGTTTG TGGAAATTTG GTCAAATGCA TCAAAAAGAA GTGAAGGTTT TGCAAAATGT AGCGTTTGCG ACAACTCCTC GTGTTGATGC GGAATTACAA CAAGTTGATT CGTATTTTAA GCGTTATGCA AGTGAACCAA TTGGCCCCGG CGAGCGAGAA GAGCTTCTTG ATCCCCAAAA CATTCAATTT ATGACAACCA CTAATCGGAT GACTGAATTA AATAATGTGG CTACCCAGAT TCGCCAATTA GTTGCTAGTG GTAAATATCG TTATCGTGAC TTCCTTATCC TTAGTCGCCA CCTTGACGGC TATCAAACAA TGATTGAACC GGTTTTTGCG GCACATAATA TTCCAGTTTT TAATGATCAT GAACGCTTGA TGGATAATCA TCCGCTAGTA ACGCTCCTCA CAACATTATT AGAATTACCG CAGCGAGGCT ATCGAACAGC AGATATCATC CAATTGCTGA AGACATGGTT ACTTGTTCCA CGGACAGGCA CTGGTGATCT GATGGGGCTA AGTGATTTCC AAGCAGCAGT TTTTACTACT GAGAATTGGT GCCTTAAGCA GGCAATTGAG GGAAAAAATG CTTGGACAAC TAATGATCCA GAAAAGATTA AGCAATTATG GCAGGCGCCC GGAACGAACC TGACAGATCC AAAGTATGAA CAGTCACGTT TAGAAAAATT AAATGACCAG TTAGCCCTTG TAAAAGATTT TGTTGCAAAC CACTTACTGC CAGTTTTCGA CCAGTTTAAA CAAGCACAAA CAGGACAAGA ACTTGCCACT GCGTTATACC AGTTCTTAGC TGCCATGGGA GTTACAGACC GGTTATATGC TTGGCAGCAA TACCAGAGTA CCCGAGATTT AGATCTCGCG CGCCAACCAC AACAAGTCTG GACTACCTTT TGCCAAATTC TCCAAGAATA TGTGGAAATC TTGGGCCAAC AAGAACTACG AGATGGAACT AATGAGGTCC TTGCAGATTT CAGTGAATTG CTCCAGGCAG GTTTTGCGGC GGCCCAGTAT TCTCAGATTC CGGCAACGTT AGACCAAGTG GTAGTCTCTG AAACTGGAAT TGTCCAAAGT GAAAACCGAA AAGTAGTTTT TATGATTGGG TCAACTGATG ATGTGATGCC TGAGATGCAA GAAAGTGATA GTTTGCTAAC GGACCAAGAT AAGGATATTT TGAGTGCTTA TCTTGATGAA GATTTCCAAT ACCTTCCTGG AACGGCAATT GACCAACTGA TTGATGAGCC ATTTGTCCAC TATACTGGCT TTATGAACGC TAAGGAACAG TTGATTTTCT CGGCACCGCA ATCAGATAGT GATGATAAGG AACTCAGTAT ATCGCCATAT ATGCACGATA TGGCTCGCTA CTTTGGTCAA CCGGTTCGTG AATATCCATT AGCTACTAGC AAGGCCGGAC AAGACAATGC TATTGATTTT GTTAGTGCCC CGCTTGCAAC AATAAACCGG TTAGTTGAAG TTAGCCGACA AATTCGTGAT GAGCAAGGGG TTGGCATTGA TCGTCAACCG GTCATGCCTG TTGGATGGCA AACAGTTGCT GAATCGTTGG TTAAGTTAGC TAAGCAATGG CAACAATCAG CGGATGCTAA GGTTCAAGCA GAAGGAATAT CACTAGGTCA GCGTCTATCT TTAGTTGCTG CTGGTTTCCA TTATCAAAAT AAGATTGATT CCCTGGGAAA TAAATTGGCT CAGGCACTTT ATCTCCGGGC AGCTCCAGAT GATGAGCGCG GGCGGGTATT ATATGCCTCG ATTTCGCAGT TGCAAGATTT TTATATTAAT CAGTACGAAT ATTTCCTTAA GTATGGCTTG AGGTTGCAAA AACGAGATGA GTTAACCTTA TCTAATGACC GTATCGGTAC CTTCTTCCAT AAAGCAATGG AGACTTTTGT TACAACAATT CGAGAAAATA ATTTGTCATT TGCAGACCTT GCCCACAAAG ATAATCAGAT GCAACGTGAC CAGCTGATTG ACCATGCATT AGTTACAGCG CAAGAGAATC AGCCAACTTT ATTGCGTCTC ATTAATTCTT CAGCCCAAGC CCAATTCCAA TATCAGCAAT TAACCGCCAT TGTTAAAACA ATGTTAATTA CATTATGCCG CCAAGCTGAA TATACCGGCT CGCAGCCAGT AAAAACCGAA GTTCAGTTTG GAAGAATTGG TAACCAACAG CCGGGCAACC TTGGTTCTCT TGATTATCCG CTTAAAGATA ATCATCATAT TTATCTGCGG GGACGAATTG ACCGAATCGA TAATCTTAAG CAAGGAAACA ATAATTTCTT GACGGTCGTT GACTATAAGT CGAGTAATCA TCTTTTTGAC CTCACTTCGG CTTATTATGG ACTCTCTCTC CAACTTTTAA CCTATCTTAA CGGGTTACAG GCAAACTTAA CTGAATTGGA AACGAATAAT CCTCGACTGG CAGGGGCATT ATATCTTCGT TTGAATAATC CGACAATTAA GGCTGCTGAG TTAAAGAAAA GTTCCCTTGA TGATTTGAAA TTAAAAGAGC ACCAATACAA GGGAATCCTC TTGAATGATC CACAATTATT GCGGGAGTTA GATAAGAGCT TAGATAAACA AGCATTCTTA TACCCACTTA AGGAATATAA GAATGGAAAA ATCAAAGCTA ATAAAGAAGC GCTTCTCGTT ACTCCGCAGC AACTTGATTG GCTGCAAAAC ATGAATAAGG AACTTGTAAT TAATGCGGGT AATCAAATTT TGAGTGGTGA CTTGAAACTG AATCCTTACC GGTTATTAAC TGGAAGCAAC CGCCGCACAG GACTTGATTA TAGTGACTTT TTAGATGTAT TTCAGTTTGA TAATATGCTT GACCAGCAAA ACTACCGCGA CTTAAATCCT AATTTAGCAA AAGAAGCATT TGATAATGTA GTCCAAGACG ATGATGAGGA GGATAAGAAG TAA
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Protein sequence | MGTLGFVLGT AAMDHQQVLI DQLVDQVKNT PADDTFYYLV PNHIKFETEI NVLAGLRDRQ GLSGSDRFAS SRVQVLSFSR LAWYLLRDTP AFQKQHLSKI GMAMLTSQVV QEQASDLRLY ASEVKQPGFI QKMTAQLEEL KNANITADDL TDIIYRVKSA NDPAANQAWL AKMYDVETIY HAYEARLRDR YIGNSELYRQ LVSYLQKSPE VAKMHFFIDR FAQFTANEQQ VVDALITNAA STTISLTLDR GYPDQNHPNP QELPPKNNLF YSSAMQFHRL WKFGQMHQKE VKVLQNVAFA TTPRVDAELQ QVDSYFKRYA SEPIGPGERE ELLDPQNIQF MTTTNRMTEL NNVATQIRQL VASGKYRYRD FLILSRHLDG YQTMIEPVFA AHNIPVFNDH ERLMDNHPLV TLLTTLLELP QRGYRTADII QLLKTWLLVP RTGTGDLMGL SDFQAAVFTT ENWCLKQAIE GKNAWTTNDP EKIKQLWQAP GTNLTDPKYE QSRLEKLNDQ LALVKDFVAN HLLPVFDQFK QAQTGQELAT ALYQFLAAMG VTDRLYAWQQ YQSTRDLDLA RQPQQVWTTF CQILQEYVEI LGQQELRDGT NEVLADFSEL LQAGFAAAQY SQIPATLDQV VVSETGIVQS ENRKVVFMIG STDDVMPEMQ ESDSLLTDQD KDILSAYLDE DFQYLPGTAI DQLIDEPFVH YTGFMNAKEQ LIFSAPQSDS DDKELSISPY MHDMARYFGQ PVREYPLATS KAGQDNAIDF VSAPLATINR LVEVSRQIRD EQGVGIDRQP VMPVGWQTVA ESLVKLAKQW QQSADAKVQA EGISLGQRLS LVAAGFHYQN KIDSLGNKLA QALYLRAAPD DERGRVLYAS ISQLQDFYIN QYEYFLKYGL RLQKRDELTL SNDRIGTFFH KAMETFVTTI RENNLSFADL AHKDNQMQRD QLIDHALVTA QENQPTLLRL INSSAQAQFQ YQQLTAIVKT MLITLCRQAE YTGSQPVKTE VQFGRIGNQQ PGNLGSLDYP LKDNHHIYLR GRIDRIDNLK QGNNNFLTVV DYKSSNHLFD LTSAYYGLSL QLLTYLNGLQ ANLTELETNN PRLAGALYLR LNNPTIKAAE LKKSSLDDLK LKEHQYKGIL LNDPQLLREL DKSLDKQAFL YPLKEYKNGK IKANKEALLV TPQQLDWLQN MNKELVINAG NQILSGDLKL NPYRLLTGSN RRTGLDYSDF LDVFQFDNML DQQNYRDLNP NLAKEAFDNV VQDDDEEDKK
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