Gene Lreu_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0046 
Symbol 
ID5188770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp50822 
End bp53677 
Gene Length2856 bp 
Protein Length951 aa 
Translation table11 
GC content40% 
IMG OID640589842 
Producthypothetical protein 
Protein accessionYP_001270659 
Protein GI148543289 
COG category[S] Function unknown 
COG ID[COG4372] Uncharacterized protein conserved in bacteria with the myosin-like domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAATT CGAATACAAA TAATTGGCGT TCAACTGCTT TGATTGCGGG GGCAATCTTG 
ACAGCAGGTG TCGTTACCAC CACTTCAACG ACAGATGTAC ACGCTGATAA TAGTCAAAAT
AATGCACAAG TAAGTAATGA CCAAGTTACT TACGACCAAG TTCGGGCAAC TGCTGATCAG
CAACTTGCAC AATTGCAATC AGCTAATGAT AGTAAAGAAG CTCAACAAGC TACGGCCAAC
GAGCAATCAA ATGCTGCGGA TCTTGCACAA ATCAACGCAC AAATTGATCA ATTAAAAGCT
AGTCATGCTG CTCTAGAACA AGAACAAGCC GGTGCTATTG CACAAGCACA AGCTTCTACT
GCTGCTTCTA TTGAAGCACA AACTTCAGCT GCTAATGCTG AATACCAACA ACAAATTAAC
GCACAACAAC AAAACGAAGC CACTCAACGT GCAGCAAATG ATCAACAGTA CGCACAAGCT
GTTAGTCAAG CTGCTGAAAA TCAACAAGCT ATTGCTGATA TCAATGCACA ATATCAACAA
GCTTTAAGTG ATGCAGCTAA TACGCAGACA AGCCAAGCAC AGGCTGCTGT CAATAATTAC
AACTCAGCTG TTGCTAAGGA AAATGATGCT TACCAAGGTA AGCTATCTGC TCAACAAGCA
ACTAATGCAG AAAATGTTAA AAATGCTGAA GCATCTCTTG CAACCGCAAC TGCTAATGCT
AACAAGCCTT ATGAAGTTGC AACTACTAAC GATGTTGCTG TTACTGGCCG AGTTGCTAAA
CCACAAACAG ATGTTAAGGT TCCTGACTAT GTAGCAAAAT ACGGAATTCA TCTAGAAGTT
CGTGGCTATA ATGGTGCTAT TCCTGTATCT GATTATACTT ATCCTGAATT TGCTAATACT
TACTATGGTG AATATCCTGA TAGTGCAGTA ATTACAAATA AGGCTGCTGA CTCAACTCCA
CATGATATTT CAGAGATGCC ATTAGATTTC CAACCAGGTC TATTAAGTTA CGATACTAAA
AATGATCATT CAGAAAAAGT TTCTGCTGAT GGATTAACAG CTGCCCAAGT TCAAGTATTA
CGGGCATTAG CTCTTTCATG GGAAAATGGA TTCCGTAACA ATGTTTTCCA AAACTACCGT
GAATTTTACA ATGCGGTTAA TAAGAATGAT GGCTTTGTGA ACGTTGCTCC AGTTGATTTA
GTAAGCACTG ACTTTGCTGA TAACATTGCT AACCAAGTTG TTGCTAACCG GACAAAGTAC
AATGTTGATA ATAATAGTCA TACTGTTATC AGCAGTGGAA TGCCTACTGA AGCAACTTAT
AGTAGCATTA TTAATAATGC CACCCAAAAC TTGCAAAAGA GTTTAACAAG TGAATTTAAT
GGTAAGACAG TTTACACTGA CGTTAATGAA AACTTAACTA CTATGCAAGC TGGGACGCCA
ACTCTTCTAA ATTACGCTAT TAATCTCTAC AACTCAATGC AGGGTATGTA CTATGGTGAA
TTGGTAAACC CAACACACAT CGGTGGACAT GCAGTTAATC TTCTTCGTGC TGGTGTTCGC
ACTGTGGGAA TTGGCTTCCA AAAGCTAACT GATGAAATGA CTGCTAAGAA TGGTTCAGGT
GTTTCTGATC GCAAGAACCC ATCATATGCT GTAACATTTG ATCATGTCGG ATTTAACATT
GATCACGATG TTAACTTAAC TAAAGAAGTT CAAAATCGTA ATGTATGGGG AACTTCAACT
GTAGATGCAC AATTAAATGC TATTAAGACT GCTCAATATC ATGTTAATAA AGTACCGGGG
ACAAAGACAG TTACGCCAAC TGCTACTGAT GTGCAAAAAG CTACTGCTAG CGAACAACAA
AAATTAGCTA ATGTTAAGGC ACAAGCACAA CAATCTCTTG ATGCATTAGC TAGTGCCCAC
CAAGCTAACT TAAATAAGCT TGAACAACAA TATAATGATG CGAAGGCTCA AGTAAAAGCT
AACTATGATA CTGCAGTTAC TAAGGCAGCT AGTGTTCGTG ATGCTGCTCT TAAGGCTACT
GGAGCTGTTG ACCTTCAAGC TTACAAGGCT CAATTAGACA GTGCCTACCA AAACTTAGTA
AAGGCTGATC AAGTAGCCGC ACAAAAGCTT GCTGCTGATC GTGACGCTAA GATCGCTAAT
ATTAAGAAAA CTGAAAATGC AAAGCTTGAT GCTAAGATTA ATGAACTTGT TCCAAGCATT
GACCCACAAA TCAAGCAATT GCAAGATCAA CACCAAGCAG TTATTACCCA TGGTGATGCT
GTTCTTGCTG AATTAAAGGC TGAAAATAAG GCTGCTTATA ACAAACTTGC TGAACAATTC
AACGTTCAAT TAGCAGCTAT TCAACAACGT GAAGATGCTA AGAGAGCTAA TGAAGTTCGG
TTAGCAAATA ATACTGTTGT TCTTCCTACA GCAGTGAAAG CAGCTAATGA TGGCAATGTT
GATACTGTTG CTTTCCCAAC GGTTACAAAC CGTCTACAAG CTGAAACTAC TGGACGCGTT
CAACCAGTTT CAGCACCATC GATTGTAAAG ACAGCTACGC AAACGCCAAT TGCAGTTGCA
CCAGTTGTAA CACAAACAGC TGCAGTTGCT GCTACTACAA ATAATGGTAC ACAAACACGG
GTTGCTTCTA CTGCTGATAA TAAAGCCACT AAAGCAGACA ACAATGAAAA ATCAGTTGTA
AAAGCTGACA CTGTTGCTAA GAAGCAAACT CCTGCTAAGA AGAGTGAATC ATCACAAAAG
GTTGATCAAT CTTCTATGTC AATTGTTGCT TTAGCTGCCA CTGCATTACT TGGTACACTC
GGTATCACTT ACAGCTCAAA GAAGCGCCAC AACTAA
 
Protein sequence
MRNSNTNNWR STALIAGAIL TAGVVTTTST TDVHADNSQN NAQVSNDQVT YDQVRATADQ 
QLAQLQSAND SKEAQQATAN EQSNAADLAQ INAQIDQLKA SHAALEQEQA GAIAQAQAST
AASIEAQTSA ANAEYQQQIN AQQQNEATQR AANDQQYAQA VSQAAENQQA IADINAQYQQ
ALSDAANTQT SQAQAAVNNY NSAVAKENDA YQGKLSAQQA TNAENVKNAE ASLATATANA
NKPYEVATTN DVAVTGRVAK PQTDVKVPDY VAKYGIHLEV RGYNGAIPVS DYTYPEFANT
YYGEYPDSAV ITNKAADSTP HDISEMPLDF QPGLLSYDTK NDHSEKVSAD GLTAAQVQVL
RALALSWENG FRNNVFQNYR EFYNAVNKND GFVNVAPVDL VSTDFADNIA NQVVANRTKY
NVDNNSHTVI SSGMPTEATY SSIINNATQN LQKSLTSEFN GKTVYTDVNE NLTTMQAGTP
TLLNYAINLY NSMQGMYYGE LVNPTHIGGH AVNLLRAGVR TVGIGFQKLT DEMTAKNGSG
VSDRKNPSYA VTFDHVGFNI DHDVNLTKEV QNRNVWGTST VDAQLNAIKT AQYHVNKVPG
TKTVTPTATD VQKATASEQQ KLANVKAQAQ QSLDALASAH QANLNKLEQQ YNDAKAQVKA
NYDTAVTKAA SVRDAALKAT GAVDLQAYKA QLDSAYQNLV KADQVAAQKL AADRDAKIAN
IKKTENAKLD AKINELVPSI DPQIKQLQDQ HQAVITHGDA VLAELKAENK AAYNKLAEQF
NVQLAAIQQR EDAKRANEVR LANNTVVLPT AVKAANDGNV DTVAFPTVTN RLQAETTGRV
QPVSAPSIVK TATQTPIAVA PVVTQTAAVA ATTNNGTQTR VASTADNKAT KADNNEKSVV
KADTVAKKQT PAKKSESSQK VDQSSMSIVA LAATALLGTL GITYSSKKRH N