Gene Lreu_0008 details

Gene Information

• Locus tag: Lreu_0008
• ID: 5188894
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: +
• Start bp: 9652
• End bp: 10215
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640589802
• Product: single-strand binding protein
• Protein accession: YP_001270621
• Protein GI: 148543251
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000000000109058
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTAATC GTGCAGTCTT AACTGGGCGT TTAACAAGAG ATCCCGAGTT GCGGTACACA 
ACCAGCGGGA CAGCAGTTGT TTCATTTACG TTAGCTGTTG ATCGGCAATT CCGAAACCAA 
AATGGTGATC GTGATGCTGA TTTTATCAAT TGCGTTATTT GGCGTAAATC CGCTGAAAAC 
TTTAGTAACT TTACGCATAA GGGTTCACTT GTTGGAATTG AAGGGCGTAT TCAAACCCGG 
AATTATGAAA ACCAACAGGG TAACCGTGTG TATGTTACCG AAGTTGTTGT AGATAATTTT 
GCATTGTTAG AACCTCGTCA AAATGGTGGC ATGAACCAAT CAGGGGTTCA ACAACCATTT 
AACAGCAACC AACAATCATT TGGTGCTCAG GCTCCACAAT ATGGTAGTCA ACCACAACCT 
GGAAATAATG CTCCTCAAAG TAATCCGTCA CCAAGTATGG ATAATGGTTT CGATCCCAAT 
CAAAATGCTG GCAACCAGTT CCCTGGAAGC AGTGATGATG GTGGTCAATC CATTGATTTA 
GCTGATGACG AATTACCATT CTAA 

 

Protein sequence

MLNRAVLTGR LTRDPELRYT TSGTAVVSFT LAVDRQFRNQ NGDRDADFIN CVIWRKSAEN 
FSNFTHKGSL VGIEGRIQTR NYENQQGNRV YVTEVVVDNF ALLEPRQNGG MNQSGVQQPF 
NSNQQSFGAQ APQYGSQPQP GNNAPQSNPS PSMDNGFDPN QNAGNQFPGS SDDGGQSIDL 
ADDELPF