Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2890 |
Symbol | |
ID | 6878894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2871206 |
End bp | 2872237 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642790743 |
Product | GDP-mannose 4,6-dehydratase |
Protein accession | YP_002221281 |
Protein GI | 198284960 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.657822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.291192 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAGC ACGCCCTCAT CACCGGCATC ACCGGCCAGG ACGGCGCCTA TCTGGCGCAA TGGTTGCTGG AAAAAGACTA TACGGTCTAT GGCCTCATCG CCCGCCGCGG CACCGATACC ACCGGCCGGT TGCACGAACT GGGCATCGCC GATCAGGTGC GCCTGCTGGA CGGCGACCTC ATCGATCTGT CCTCCATGAT CCGCGCCATG GAAAAGTCCC AGGCGACGGA AGTCTATAAC CTGGGCGCCC AGAGCTTTGT GGCCACCTCC TGGGATCAAC CGATTCTGAC CGCAGAAGTC ACCGGCACCT CTGTGGTCAA GATGCTGGAG GCCATCCGCA TCGTCAACCC CCAGGCGCGT TTCTATCAGG CATCCACCAG CGAGATGTTC GGGCAGATTC AGGAACCGCT CCAGTCCGAA CGCACGCCCT TTCATCCCCG CAGCCCCTAT GGCGTCGCCA AGCTCTACGG CCACTGGATC ACCGTCAACT ACCGCGAGAG CTTCGGCCTG CATGCCTCCA GCGGCATCCT CTTCAACCAC GAATCCCCCC TGCGCGGCAC CGAGTTCGTC ACCCGCAAGA TCACCCTGGC GCTGGCGCGC ATCCGTCAGG GCGTACAGGA CGTGCTGGAG CTGGGCAATC TCGACAGCAA ACGCGACTGG GGTTATGCGG GCGACTATGT GCGCGCCATG TGGCTGATGC TGCAGCAGGA GCAGCCCGAT GATTATGTCA TCGCTACCGG CGAGACCTGG ACGGTGCGCA CCTTTGTCGA GAAGGCCGCC GCCCATGCGG GATTCGATCT GGAGTGGCGG GGCGAGGCGG AAAAGACCCA GGGCGTCGAT CGCCGGAGCG GCAAGGTCAT CGTCCGCGTC AACCCGGCCT TCTACCGCCC CGCCGAGGTG GACATCCTCA TCGGTGATCC CGGCAAGGCC CAGCAGAAGC TGGGCTGGAA GCGCGAAGTC GGCTTCGATG CCCTGGTGCG GATGATGGCC GAAGCCGACC TGCGGCGCGT GGCGGGAGAA GTTGTGGAAT GA
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Protein sequence | MTKHALITGI TGQDGAYLAQ WLLEKDYTVY GLIARRGTDT TGRLHELGIA DQVRLLDGDL IDLSSMIRAM EKSQATEVYN LGAQSFVATS WDQPILTAEV TGTSVVKMLE AIRIVNPQAR FYQASTSEMF GQIQEPLQSE RTPFHPRSPY GVAKLYGHWI TVNYRESFGL HASSGILFNH ESPLRGTEFV TRKITLALAR IRQGVQDVLE LGNLDSKRDW GYAGDYVRAM WLMLQQEQPD DYVIATGETW TVRTFVEKAA AHAGFDLEWR GEAEKTQGVD RRSGKVIVRV NPAFYRPAEV DILIGDPGKA QQKLGWKREV GFDALVRMMA EADLRRVAGE VVE
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