Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2817 |
Symbol | |
ID | 6878820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2800729 |
End bp | 2801394 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642790671 |
Product | methyltransferase GidB |
Protein accession | YP_002221210 |
Protein GI | 198284889 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.279584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGC CGGAGCTGTC CTCGCAAGCG CTGCATGCCC GTCTGAATGC CGGACTGGTG GCTCTCGGCC TCGACCGCAC GGTCGGTGCT GAGCAGCGTG ACCTGCTGAT CCACTACGTC GCCCTCCTGC AGCGCTGGAA TGCCACCCAC AACCTGACGG CGGTGCGGGA TCCCCTGGAG ATGGTGCCCC GCCATCTGCT GGACAGCCTG GCGGTGCTCC CCTATTTGCC GGAGGGTGCG GTGGTGGATA TCGGTAGCGG CGCCGGATTG CCCGGCATCC CCCTTGCTAT CTGCTGCCCA GCACAAGCGT TCACCCTGGT GGAACCGGCG GCCAAACGGG TCGCTTTCCT CCGCTACGCC ATCGCAGATC TTGGGTTGAC CAACGTGCAG GTTGCCCCGC AGGGCAGCGA AGATTATCAC CCCGATCTCC TGCCAGACGT CATCATCAGC CGTGCCACCG CGCCCCTCGC TCGTCTCGAC GCCATGACCA GGCACCTCCA GGGCCCGCAC ACCTGGGTGC TTGCCCAGAA AGGTCCGGGT GTCGGGGAGG AGTTGACCGA CTGGCCCCGT GCGGCATCCC TCCACATCAC CCGTCGGGAC CTCGCCGTTC CCGGCCTGCC ACCGCGTTTT CTGCTTTCCT GGCGCATCCC GGTCGCCACG CCCTAG
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Protein sequence | MTKPELSSQA LHARLNAGLV ALGLDRTVGA EQRDLLIHYV ALLQRWNATH NLTAVRDPLE MVPRHLLDSL AVLPYLPEGA VVDIGSGAGL PGIPLAICCP AQAFTLVEPA AKRVAFLRYA IADLGLTNVQ VAPQGSEDYH PDLLPDVIIS RATAPLARLD AMTRHLQGPH TWVLAQKGPG VGEELTDWPR AASLHITRRD LAVPGLPPRF LLSWRIPVAT P
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