Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2728 |
Symbol | |
ID | 6878732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2715535 |
End bp | 2716959 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642790588 |
Product | Chloride channel core |
Protein accession | YP_002221127 |
Protein GI | 198284806 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.969759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000119016 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAAATG AAAGGTTTGT CGTGAACCAT ATCGAATCTA CTGATGAACA GGCACCCCAA CATAGCTGGA AAAATATACT TGAACCGCCT GCAAAAGGTA AAAACAAGGC GCGATACTTT ATTACCCCTG TTATTATCGG AATCATTGTT GGGGTATTAT CTTTAGTTTT TATTGATATA ATGGATTTTT TTACGAGATT GTCTTTGGGT GTCGTTGCAC ATTTCACTCC CCCGCGTTCG TCCGGTTTTG GCGGGGGGGT CGAGTCGCGC TACACCTCCG CCCCGGGCTA TCCTTTCATG ATTCCTCTTG TCGAAGGAAT GGCTGCGTTC ATTTCCGGGG TGCTGTCCTA TTTTATGATT AAAAATCCGG GGAGTCTTGG TGCCAACAAA GCGATTCGCG CTTACCATGA GAACCCTGAA TCCCTCACTT TAAAGGAGGC ATTTACCACG CTTTTTACTT CAGCTATGGT TCTTGGCTCC GGCGGGCCTT CTGGCCGCGA GGGCGCGGTA AGCATGGTGG GCGGCAGCGT CGGCGTGTTC ATTGCCAAGC TGCTCCGGCA AAAACCCCAT GAAGTGCGCG AAGCTTTGGC TATAGGGGTC GGCGCCGGGC TGGGAGCCAT GTTTAAGGCG CCTCTCGCGG GGGCAATTGC TAGTAGTGAA ATATTTTTCA AGCACGATTT CGATATCGAA ACGATCATTC CCGCGTTTGC CGCATCGGCT GCAGCTTACC TGGTGGTAGC CACCAAGGTA GGATTTTCGC CGCTGTTCCG CATAGGTGTT CTGCCGGTAC ACAACTTTGA GTTGAGATAT ATTCTGTGGT TTTCCATTTT TGGTATTTTT TCCGGTCTGA TTGCCCGCTT TCTGTTGTGG GTGTTTTATT ATATTTCTGA TTTGTTCAAG AAGCTGAAGC AGCCGATCTA TGTCACTGCC CTGATAGGCG GTGTCCTGGC CGGCTGCATT GGTTTGTTAT CTTCTTATGC CATAGGCAAC GGCTATGGCT GGTTGCAGTT GATCATGGAC CACAAAATCT CCCCTGGAGT ATCCGAATTA ACGCTTGGTA TAATTTGTGT CATTCTGGCC ATGTCCCTGA TTGCCGGATC CGGGGCATCT GGCGGGGCCT TTAGCCCAAC GGTGGTTATC GGTGGGCTCT CGGGCGCCTT GTTCTGGCAT TTTGCGAAGG TGGTTTCCCC TAACCTCAAT ATACCCATTG CCATGTTTGT GGTGGTCGGC ATGATGGCGG TCTTTTCCGT AGCGGCCAAC GCGCCCTTGT CTACTATCGT CATGATCACC GAAATGACCG GGAGCTATGG TGTACTTCTG CCCGCCATGC TCACGGTAGG AATAGCAATG ATGTTTGGCG GTGAGCATTC ATTATTCAAC GCACAGCACG ACCACCGGTC AGCGTCAGGC CACACCAACT CATGA
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Protein sequence | MENERFVVNH IESTDEQAPQ HSWKNILEPP AKGKNKARYF ITPVIIGIIV GVLSLVFIDI MDFFTRLSLG VVAHFTPPRS SGFGGGVESR YTSAPGYPFM IPLVEGMAAF ISGVLSYFMI KNPGSLGANK AIRAYHENPE SLTLKEAFTT LFTSAMVLGS GGPSGREGAV SMVGGSVGVF IAKLLRQKPH EVREALAIGV GAGLGAMFKA PLAGAIASSE IFFKHDFDIE TIIPAFAASA AAYLVVATKV GFSPLFRIGV LPVHNFELRY ILWFSIFGIF SGLIARFLLW VFYYISDLFK KLKQPIYVTA LIGGVLAGCI GLLSSYAIGN GYGWLQLIMD HKISPGVSEL TLGIICVILA MSLIAGSGAS GGAFSPTVVI GGLSGALFWH FAKVVSPNLN IPIAMFVVVG MMAVFSVAAN APLSTIVMIT EMTGSYGVLL PAMLTVGIAM MFGGEHSLFN AQHDHRSASG HTNS
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