Gene Lferr_2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2708 
Symbol 
ID6878712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2694753 
End bp2695961 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content48% 
IMG OID642790568 
ProductCytochrome b/b6 domain 
Protein accessionYP_002221107 
Protein GI198284786 
COG category[C] Energy production and conversion 
COG ID[COG1290] Cytochrome b subunit of the bc complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000216389 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000381098 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGTAGAT TTTCGGCATG GGTTAACAAG AGGCTCCCGG TAGATGAGAC CATAAGGGAG 
CACATGACAG AATATTTTGC GCCAAGAAAC TTCAATATTC TATACTATGC AGGATCATTG
CTGTTGTTGA TGATCGTGCT CCAGCTGATT AGCGGGTTTT TTCTGATGGC GCATTATGTT
CCTACATCTC AAGATGCCTT TGCTTCAGTG CAAGGCATCA TGTACGACAC AAAATGGGGC
TGGTTGATAC GCTATATGCA TGTTGATGGC GTATCTTTAA TATTTATCTT ACTCTATACC
CATATGTTTC GCGGGCTACT GTATGGCTCG CATCGTGCCC CTAGGGAGCT TGTTTGGGTT
ATCGGGTATG TTATTTATTT GTTAATGATG GCGGAAGCCT TTGTCGGCTA TGTATTGCCA
TTTGGAAATT TATCTTATTG GGCTGGCGAG GTTATTACCT CCATCATGCA CGCACTGCCG
GTGGTTGGGC CATCTCTTAC TACCCTGACG CGCGGCGGGC CCGGGATTGG GTCTGCGACA
CTGCAACGCT TTCTAGCGCT GCACGTGGTT CTGTTCTTCC TTATTATTCT CGCAGCCATC
GCGCTCCATA TCGTAGCATT GCATCGGGTA GGTTCGAACA ACCCCGACGG TATTGACATC
AAAAAACACA AGGGCCCGGA TGGAAAACCG TTAGATGGTG TACCATTTCA CCCATATTAT
ACCGTGAAAG ACCTGTTTGG TGTTGGGGTT TGGCTGACCA TATTTGTTTC TGTTATATTT
TATGCTCCAA CCATGCATGG GGTATTCATG GAACGTACGA CGTTCCTTGC CGCAAACCCG
ATGGTCAGTT TACCAGATGT AACCCCACCT TGGTACCTAT CGCCTTATTA CGCAATGCTC
CGTGCGGTAC CTAACAAGTA TTACGGAATC GCAATAATGA TTACATCCGT CTTGCTGCCG
TTGCTGTTGC CTTGGCTCGA TCGTAACCCG GTTCGGTCCA GCAGATACCG TCCAGTGTAC
AGGATAATGC TTATTGTTGC GGGGGTTTCC TTCATTATTT TGGCATGGAT TGGTCAGGAA
CCACCGTTGC CTAAATATTT CTTGATCGAG CGGGTGGCGA CAGCTTTATA CCTCGGGTTT
TACCTCTTGC TGCCGTTCGT TAGCATGATA GAACCTACAC GGCCCGTACC GGAGAGGGTT
ACAGGATGA
 
Protein sequence
MSRFSAWVNK RLPVDETIRE HMTEYFAPRN FNILYYAGSL LLLMIVLQLI SGFFLMAHYV 
PTSQDAFASV QGIMYDTKWG WLIRYMHVDG VSLIFILLYT HMFRGLLYGS HRAPRELVWV
IGYVIYLLMM AEAFVGYVLP FGNLSYWAGE VITSIMHALP VVGPSLTTLT RGGPGIGSAT
LQRFLALHVV LFFLIILAAI ALHIVALHRV GSNNPDGIDI KKHKGPDGKP LDGVPFHPYY
TVKDLFGVGV WLTIFVSVIF YAPTMHGVFM ERTTFLAANP MVSLPDVTPP WYLSPYYAML
RAVPNKYYGI AIMITSVLLP LLLPWLDRNP VRSSRYRPVY RIMLIVAGVS FIILAWIGQE
PPLPKYFLIE RVATALYLGF YLLLPFVSMI EPTRPVPERV TG