| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2692 |
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| Symbol | |
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| ID | 6878696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2679076 |
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| End bp | 2681775 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642790553 |
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| Product | DNA polymerase I |
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| Protein accession | YP_002221092 |
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| Protein GI | 198284771 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.700333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00010677 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCAAG ATCCCCGTAT CCTCGTCGAT GCCTCCAGTT TCCTCTATCG TGCCTTTCAC
GCGCTGCCTG ACTTGCGCGC CCCGGACAAT CTTCCGACCG GAGCCATTTA CGGCGTCGCC
AACATGCTCC GCCGCCTGCT GAAGGAGCAT CCGAGTGACG AAATCATCGT CATATTCGAC
GCCCCCGGCG GGACATTTCG GGACAGACTT TATCCTGAGT ATAAGGCACA CCGGCCGGCC
ATGCCGGAGG AGCTACGAGT CCAGGTTCCG CTGCTGCACG ACTGGATCAG GGCCACCGGC
CTGCCGCTCG TGATCGAGCC CGATGTGGAG GCGGATGACG TGATCGGCAC CCTGGCCCGG
GAGGCGGCGC CCGACCAGCA GGTGCTTATC GTCACCGGCG ACAAGGACAT GGCCCAATTG
GTGAACTCGC GGGTGCGGCT TATCGATACC ATGAAAGGTA TCGAAACGGA TGCGGCCGGG
GTTGAGGAGC GCTTTGGTGT ACCGCCGGAG CGTATTGCCG ACCTGCTGGC GTTGATCGGC
GACAAGGTGG ACAACATTCC CGGCGTGCCC GGGGTCGGAC CGAAAACGGC TGCCCGGTGG
CTGACGCAAT ATGGCGATCT GGACGGTGTG CTGGCCCACG CCGGCGATAT CGGCGGCAAG
GTGGGTGAGG CGCTGCGTGC CTCCGCACAT TATCTGCCTT TGAGCCGCGA TCTGGCGACC
ATTCGCTGTG ATCTGACGCT GCCTGTCGCG ACGTACGCCC GCCGGGCGGC GGATGTGGTC
GCCTTGCGGG CGTTGGCGCA GCGCCTGGGT TTTCAGGCCT GGCTCAGGGA CCTGCCTGCG
GGCGATGCGG GGAAAGTGCC GGAAAAGCGG AGCAGTGATA TAGATCGCGC CGCCTACCGG
GCCATCACCA CTGCGGAAGC GCTGGATGTG CTGCTGCTTG CCCTGAAAGC GGCCGATGTG
GTCGCTTTGG ATACGGAAAC CACGAGCCTC GATCCGCTGC ATGCCGATCT GGTGGGAATT
TCCTGTGCCT GGCAGGCCGG TGGCGACTAT CAGGCTGTCT ACGTTCCCGT TGGCCACCGC
GACGCTGGTC CGCAACTGGA TCGACAGACA GTCCTCACCG CCTTGCGCCC GTGGTTGGAA
GACCCGCAGG CCGCCAAGCT GGCCCAGAAC GCTAAATACG ATTGGCGGGT TTTCTGGCGA
CATGGCATCC ACCCCGCCGG CCTGGCCCGC GACACGTTGC TGGAAAGCTA CGTCTTAAAC
AGCAGTCACA ATGGTCACGA TCTGGATACC CTCGCCGAGC GCTACTTGCA ACATCAGAAT
ATCCGCTACG AAGAGGTGGT CGGCAAAGGC AAGTCAGCGC GTAATTTCGC CGATGTGCCG
GTAGCGGAGG CGCTGCCCTA CGCGGCAGAG GATGCCGATG TCTGTCTGCG TGTGGACGCG
CTGCTCTGGC CGCGGTTCGC CAGCGAGCCG GGCTTGCGGC GCGTGTTGAT GGAAATAGAG
ATGCCGCTGG TGCTGGTGCT GGCGCGTATG GAAGAAGCGG GCGTCAAAAT CGATCGTGCC
CAGCTCGAAG TGCTGAGCAC GGAACTGAGT AGAGACATGG CGGACTGTGA ACAGAAGGCC
TTTGTTCTGG CGGGGCAGTC CTTCAACCTC AACTCCCCAA AGCAGATTCA GGAAATTCTC
TTCGACAAGA TGCGGTTGCC GGTACTCAAG AAAACCCCCG GCGGTCAGCC GTCGACCAAT
GAAGATGTGC TCGCCCAGCT CGCTGTTCAT GCCGATCTGC CGCGCCTGAT TCTGGATTAT
CGTGGCATGG CCAAGCTCAA GAACACCTAT GCGGATGCAC TGCCGCAGAT GATCAATCCC
GACACCGGCC GGGTCCATAC CCATTTTCAG CAGGCGGTCG CGGCCACCGG ACGCCTTTCC
TCCAACGATC CGAACCTGCA AAATATCCCG GTGCGTACCG AACAGGGTCG GCGTATCCGC
CAGGCTTTTG TCGCCGAGGA GGGGCACTGG CTGCTGAGCG CCGATTACTC ACAGATCGAA
CTGCGTATCC TGGCCCATCT CTCCGGGGAT GCACGCCTGT TGCAAGCCTT TGCGGAGGGC
GAGGACATTC ATGCGGTTAC CGCTGCCGAG GTCTTTGATC TGGCTCCGGA AGATGTGGAC
AGTGCCGCAC GTCGTGCCGC CAAGGCTATC AACTTCGGTC TGATTTATGG GCAGACGCCC
TACGGCCTTG CGCAACAGTT GGGCATTGAT CAGGCGGCCG CGCGGCAATA CATGGACCGT
TACTTCGAGC GCTATCTGGG TGTTCTCGAA TATATGGCGC AGACCCGTGC CCTGGCGAAA
AAGCAGGGCT ATGTGGAGAC ACTCTTTGGC CGTCGCCTGT ATGTACCGGA GATTCGCTCC
AGCAACCCGG CTCGGCGTAC TTATGCCGAG CGTGCCGCCA TTAACGCACC TATGCAGGGC
ACTGCGGCGG ATCTCATCAA GATGGCGATG ATTGCCGTGG ATGCCTGGTT GCAGGAACGG
CCCGAGCGTG GTCGGATGAT TCTCCAGGTA CATGACGAAC TGATTCTGGA GGTGCCGGAG
GCCGGCCTGG AGGCTGCGAA GTCGGCACTA AAGGCGCGTA TGGAGGGGGT AGCGGAACTG
GCGGTGCCGC TCCTCGTGGG GTTGGGTATC GGCAAGCACT GGGATGAAGC GCATGGCTGA
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| Protein sequence | MPQDPRILVD ASSFLYRAFH ALPDLRAPDN LPTGAIYGVA NMLRRLLKEH PSDEIIVIFD
APGGTFRDRL YPEYKAHRPA MPEELRVQVP LLHDWIRATG LPLVIEPDVE ADDVIGTLAR
EAAPDQQVLI VTGDKDMAQL VNSRVRLIDT MKGIETDAAG VEERFGVPPE RIADLLALIG
DKVDNIPGVP GVGPKTAARW LTQYGDLDGV LAHAGDIGGK VGEALRASAH YLPLSRDLAT
IRCDLTLPVA TYARRAADVV ALRALAQRLG FQAWLRDLPA GDAGKVPEKR SSDIDRAAYR
AITTAEALDV LLLALKAADV VALDTETTSL DPLHADLVGI SCAWQAGGDY QAVYVPVGHR
DAGPQLDRQT VLTALRPWLE DPQAAKLAQN AKYDWRVFWR HGIHPAGLAR DTLLESYVLN
SSHNGHDLDT LAERYLQHQN IRYEEVVGKG KSARNFADVP VAEALPYAAE DADVCLRVDA
LLWPRFASEP GLRRVLMEIE MPLVLVLARM EEAGVKIDRA QLEVLSTELS RDMADCEQKA
FVLAGQSFNL NSPKQIQEIL FDKMRLPVLK KTPGGQPSTN EDVLAQLAVH ADLPRLILDY
RGMAKLKNTY ADALPQMINP DTGRVHTHFQ QAVAATGRLS SNDPNLQNIP VRTEQGRRIR
QAFVAEEGHW LLSADYSQIE LRILAHLSGD ARLLQAFAEG EDIHAVTAAE VFDLAPEDVD
SAARRAAKAI NFGLIYGQTP YGLAQQLGID QAAARQYMDR YFERYLGVLE YMAQTRALAK
KQGYVETLFG RRLYVPEIRS SNPARRTYAE RAAINAPMQG TAADLIKMAM IAVDAWLQER
PERGRMILQV HDELILEVPE AGLEAAKSAL KARMEGVAEL AVPLLVGLGI GKHWDEAHG
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