Gene Lferr_2689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2689 
Symbol 
ID6878693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2675707 
End bp2676900 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content61% 
IMG OID642790550 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002221089 
Protein GI198284768 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0230105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCAC GCGCCGCGCG CAGCGTGGGG CAGGGTGCGC TGGTCGTCGA CTTTGCACTC 
TATCTGCATG CCCTGCATTG GTCGGCATTG GCTATTGGCC TCCTGTACTC GGCCAGCCTG
CTGGTCGGCG CTGTAGCGAC ACTGCTGGTG GGCCCCCTGA GCGATCACTT TGGTGCCAAA
GGCTTTCTGC TGGGCTACGA GGCAGTTCAG CTCATCGCGG CGTCCATCGC GCTGAGTACC
GCCCAGCCCA TCTGGCTCAC TCTGGCAGCC GTATTGGGCG GGTTCGGTCG CGGCGCCAAC
GGCGGGGCAG GGCCCTTCGC ACCAGCGGAG CAATCCTGGA TATCCCGGAG TGTAACCCGC
GGGCAATGGG GACAGGTGTT CCATTTGAAT ACCAGCATCG GGCTCCTGGG GATGGCCGCC
GGCGCTACGC TGGCAGCCTT ACCCGGCCTA TTGGCAGGCG TATTGCCGGG TACCGAGGCC
TACAGGTTGC TCTTCCTGGT TGTCTTGCTG GGTTCGCTTA TCTGTCTGCT GTTTTTGGGT
GCGGCAAAAG AATCGACGGC CGATACGGCA TCCGCAGTGC ACAGTGAGCA GATACAGACT
GCTCCTCCGA AGGTGCGCAA GCCCATCTGG CGGGTGTTGC TGACTTTCGG TACTATTAAT
GCACTGAATG GTCTGGGAAT TGGTATGGTA GGACCGTTGA TGGCGTACTG GTTTCACCTG
CGCTTTGGGG TGGGGCCCGC GGCGATTGGT GGCGCGATGG CCCTCGCCTT CGTCAGTGCC
GCTTTCATGT CGCTGATCGG TCTACACCTC ATTCGGCGCT TTGGCCTGGT CGGAACGGTT
TTGCGTATGC GTCTGCTCGG GTTGGCGCTA CTGCTGGCTC TGCCGTTTGC ACCGTTTTTC
TGGGTGGCGA TGCTGCTCTT CATCGCCCGC GCGGCCTTGA ATCAGGGGAG CATAGGCTCA
CGGCAGGCCC TCTTTCTGGG TCTGGTGGAC AAGAGCCAAC GCGGCCTGGC CGCGACGGTG
AACAGCCTGT CAGTGCAGGC ACCGCGCTCT ATCGGCCCGA CCATTACCGC CCTGTTCTTT
CAGGCAGAGA TGCTGGTAAC GCCTTTTTTG ATTGCGGGGG CGCTGCAAGG CCTTTATCTA
TACTTTTTCC AGCGGTTTTT TAGCCGGGCG GAGGACCACG ACCAAGGCGC GTAG
 
Protein sequence
MGARAARSVG QGALVVDFAL YLHALHWSAL AIGLLYSASL LVGAVATLLV GPLSDHFGAK 
GFLLGYEAVQ LIAASIALST AQPIWLTLAA VLGGFGRGAN GGAGPFAPAE QSWISRSVTR
GQWGQVFHLN TSIGLLGMAA GATLAALPGL LAGVLPGTEA YRLLFLVVLL GSLICLLFLG
AAKESTADTA SAVHSEQIQT APPKVRKPIW RVLLTFGTIN ALNGLGIGMV GPLMAYWFHL
RFGVGPAAIG GAMALAFVSA AFMSLIGLHL IRRFGLVGTV LRMRLLGLAL LLALPFAPFF
WVAMLLFIAR AALNQGSIGS RQALFLGLVD KSQRGLAATV NSLSVQAPRS IGPTITALFF
QAEMLVTPFL IAGALQGLYL YFFQRFFSRA EDHDQGA