Gene Lferr_2686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2686 
Symbol 
ID6878690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2671420 
End bp2672637 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content59% 
IMG OID642790547 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_002221086 
Protein GI198284765 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000803186 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.260014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCATC AGGATGCATT CGAACAAATC GCGTTTGGCA CCGTCGACAT GCTGCCCGAA 
GGCGAAATGC TGGCGCGGCT CGCAGCGGCG CAGCGCGATA ACCGCCCCCT ACGGATCAAG
CTGGGCATGG ATCCCACCGC CCCGGATCTG CACCTGGGGC ATACCGTGCT ACTCCATAAG
GCCCGTCAAT TCCAGGATCT CGGCCATCGC CTGCTGTTCG TTATCGGCGA TTTCACCGCC
ATGATCGGCG ACCCCACGGG CAAGAGCGTT ACCCGCAAAG CGTTGAGTCG CGAAGAGGTG
GTGGCCAATG CCGCGACGTA TCGGCGCCAG GTATTCAAGA TACTGGACCC CGAGCGTACC
GAAGTGATGT TCAACTCGGA GTGGTTGGGC GCCCTGCGTC CTGAGGAGCT GATCCAGATT
GCCGCGTGTT ATACCGTGGC GCGCATGCTG GAGCGCGATG ACTTCAACAA GCGTTACAGT
GCGAATCAGC CCATCGCCAT TCACGAGTTT CTCTATCCTT TGCTACAAGG TTATGACTCG
GTCGCTATCA AAGCGGACGT GGAGCTGGGC GGCACGGACC AGCGCTTCAA CCTGCTGGTG
GGTCGGGAAT TACAACGAGA GTACGGCCAG AAACCGCAGT TGGTGCTCAC CATGCCCATT
CTCGAGGGTC TGGACGGTGT GCAAAAGATG TCCAAATCCC TGGGCAATTT CATCGCAGTA
GAAGACCCGC CCGCAGAGAT GTTCGGCAAG ATCATGTCTA TCTCGGACTT CCTGATGTGG
CGTTACTACG CGCTACTTTC CCGTGTACCT GCGGTAGAGC AGACGCGCCT GCAGAAAGAG
GCGGCCAGTG GGGCGCGCAA TCCGCGTGAT ATCAAGCTGG ATCTGGCTGG TGAGTTGGTG
CGTCGTTTTC ACGGCACCGC GGCGGCTCAG GAAGCGCATA TCGCCTTCCT TGCACGGTTT
CAGCGCCACG AAACTCCTGA AGATCTGCCG CTGCAAGCCA TAAAGCTGTC CGAGGCCCCT
CGACTCAGTC AGCTATTGGT ACAGGTACAC CTTGCTGCCA GTACCAGCGA GGCGATGCGT
AAGATGAAGG AGGGCGCTGT GCGGGTCGAC GGCGAACGGG TTGTCGACCC TGCGACAATT
CTGGCTCTGG ATGCGGTATA TCTGCTGCAA TTTGGTAAAC GGCACTTCGC CCGCGTCGCT
CTGCAGAAAG GCGAATGA
 
Protein sequence
MKHQDAFEQI AFGTVDMLPE GEMLARLAAA QRDNRPLRIK LGMDPTAPDL HLGHTVLLHK 
ARQFQDLGHR LLFVIGDFTA MIGDPTGKSV TRKALSREEV VANAATYRRQ VFKILDPERT
EVMFNSEWLG ALRPEELIQI AACYTVARML ERDDFNKRYS ANQPIAIHEF LYPLLQGYDS
VAIKADVELG GTDQRFNLLV GRELQREYGQ KPQLVLTMPI LEGLDGVQKM SKSLGNFIAV
EDPPAEMFGK IMSISDFLMW RYYALLSRVP AVEQTRLQKE AASGARNPRD IKLDLAGELV
RRFHGTAAAQ EAHIAFLARF QRHETPEDLP LQAIKLSEAP RLSQLLVQVH LAASTSEAMR
KMKEGAVRVD GERVVDPATI LALDAVYLLQ FGKRHFARVA LQKGE