Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2686 |
Symbol | |
ID | 6878690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2671420 |
End bp | 2672637 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642790547 |
Product | tyrosyl-tRNA synthetase |
Protein accession | YP_002221086 |
Protein GI | 198284765 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0162] Tyrosyl-tRNA synthetase |
TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000803186 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.260014 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCATC AGGATGCATT CGAACAAATC GCGTTTGGCA CCGTCGACAT GCTGCCCGAA GGCGAAATGC TGGCGCGGCT CGCAGCGGCG CAGCGCGATA ACCGCCCCCT ACGGATCAAG CTGGGCATGG ATCCCACCGC CCCGGATCTG CACCTGGGGC ATACCGTGCT ACTCCATAAG GCCCGTCAAT TCCAGGATCT CGGCCATCGC CTGCTGTTCG TTATCGGCGA TTTCACCGCC ATGATCGGCG ACCCCACGGG CAAGAGCGTT ACCCGCAAAG CGTTGAGTCG CGAAGAGGTG GTGGCCAATG CCGCGACGTA TCGGCGCCAG GTATTCAAGA TACTGGACCC CGAGCGTACC GAAGTGATGT TCAACTCGGA GTGGTTGGGC GCCCTGCGTC CTGAGGAGCT GATCCAGATT GCCGCGTGTT ATACCGTGGC GCGCATGCTG GAGCGCGATG ACTTCAACAA GCGTTACAGT GCGAATCAGC CCATCGCCAT TCACGAGTTT CTCTATCCTT TGCTACAAGG TTATGACTCG GTCGCTATCA AAGCGGACGT GGAGCTGGGC GGCACGGACC AGCGCTTCAA CCTGCTGGTG GGTCGGGAAT TACAACGAGA GTACGGCCAG AAACCGCAGT TGGTGCTCAC CATGCCCATT CTCGAGGGTC TGGACGGTGT GCAAAAGATG TCCAAATCCC TGGGCAATTT CATCGCAGTA GAAGACCCGC CCGCAGAGAT GTTCGGCAAG ATCATGTCTA TCTCGGACTT CCTGATGTGG CGTTACTACG CGCTACTTTC CCGTGTACCT GCGGTAGAGC AGACGCGCCT GCAGAAAGAG GCGGCCAGTG GGGCGCGCAA TCCGCGTGAT ATCAAGCTGG ATCTGGCTGG TGAGTTGGTG CGTCGTTTTC ACGGCACCGC GGCGGCTCAG GAAGCGCATA TCGCCTTCCT TGCACGGTTT CAGCGCCACG AAACTCCTGA AGATCTGCCG CTGCAAGCCA TAAAGCTGTC CGAGGCCCCT CGACTCAGTC AGCTATTGGT ACAGGTACAC CTTGCTGCCA GTACCAGCGA GGCGATGCGT AAGATGAAGG AGGGCGCTGT GCGGGTCGAC GGCGAACGGG TTGTCGACCC TGCGACAATT CTGGCTCTGG ATGCGGTATA TCTGCTGCAA TTTGGTAAAC GGCACTTCGC CCGCGTCGCT CTGCAGAAAG GCGAATGA
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Protein sequence | MKHQDAFEQI AFGTVDMLPE GEMLARLAAA QRDNRPLRIK LGMDPTAPDL HLGHTVLLHK ARQFQDLGHR LLFVIGDFTA MIGDPTGKSV TRKALSREEV VANAATYRRQ VFKILDPERT EVMFNSEWLG ALRPEELIQI AACYTVARML ERDDFNKRYS ANQPIAIHEF LYPLLQGYDS VAIKADVELG GTDQRFNLLV GRELQREYGQ KPQLVLTMPI LEGLDGVQKM SKSLGNFIAV EDPPAEMFGK IMSISDFLMW RYYALLSRVP AVEQTRLQKE AASGARNPRD IKLDLAGELV RRFHGTAAAQ EAHIAFLARF QRHETPEDLP LQAIKLSEAP RLSQLLVQVH LAASTSEAMR KMKEGAVRVD GERVVDPATI LALDAVYLLQ FGKRHFARVA LQKGE
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